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Term: sample name (samp_name)

A local identifier or name that for the material sample used for extracting nucleic acids, and subsequent sequencing. It can refer either to the original material collected or to any derived sub-samples. It can have any format, but we suggest that you make it concise, unique and consistent within your lab, and as informative as possible. INSDC requires every sample name from a single Submitter to be unique. Use of a globally unique identifier for the field source_mat_id is recommended in addition to sample_name

URI: MIXS:0001107

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use samp_name.

Name Description Checklist/Extension
HumanVaginal A collection of terms appropriate when collecting samples and sequencing samp... Extension
Mims Metagenome or Environmental Checklist
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
Air A collection of terms appropriate when collecting and sequencing samples obta... Extension
BuiltEnvironment A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsVi Minimal Information about a Genome Sequence: virus Checklist
HumanGut A collection of terms appropriate when collecting samples and sequencing samp... Extension
WastewaterSludge A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MiscellaneousNaturalOrArtificialEnvironment A collection of generic terms appropriate when collecting and sequencing samp... Extension
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
HumanAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
HumanOral A collection of terms appropriate when collecting samples and sequencing samp... Extension
Sediment A collection of terms appropriate when collecting samples and sequencing samp... Extension
Soil A collection of terms appropriate when collecting samples and sequencing samp... Extension
PlantAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
MicrobialMatBiofilm A collection of terms appropriate when collecting samples and sequencing samp... Extension
SymbiontAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
MimarksC Minimal Information about a Marker Specimen: specimen Checklist
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension
HostAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
HydrocarbonResourcesFluidsSwabs A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
HumanSkin A collection of terms appropriate when collecting samples and sequencing samp... Extension
Water A collection of terms appropriate when collecting samples and sequencing wate... Extension
HydrocarbonResourcesCores A collection of terms appropriate when collecting samples and sequencing samp... Extension
MimarksS Minimal Information about a Marker Specimen: survey Checklist

Properties

  • Range: String
  • Cardinality: 1

Examples

Value
ISDsoil1

LinkML Source

name: samp_name
annotations:
  Preferred_unit:
    tag: Preferred_unit
    value: ''
description: A local identifier or name that for the material sample used for extracting
  nucleic acids, and subsequent sequencing. It can refer either to the original material
  collected or to any derived sub-samples. It can have any format, but we suggest
  that you make it concise, unique and consistent within your lab, and as informative
  as possible. INSDC requires every sample name from a single Submitter to be unique.
  Use of a globally unique identifier for the field source_mat_id is recommended in
  addition to sample_name
title: sample name
examples:
- value: ISDsoil1
in_subset:
- investigation
from_schema: https://w3id.org/mixs
keywords:
- sample
slot_uri: MIXS:0001107
alias: samp_name
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Air
- BuiltEnvironment
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
required: true