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Term: nucleic acid extraction (nucl_acid_ext)

A link to a literature reference, electronic resource or a standard operating procedure (SOP), that describes the material separation to recover the nucleic acid fraction from a sample

URI: MIXS:0000037

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use nucl_acid_ext.

Name Description Checklist/Extension
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MimarksC Minimal Information about a Marker Sequence: specimen Checklist
MigsVi Minimal Information about a Genome Sequence: virus Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
MimsMisip Metagenome or Environmental with SIP Checklist
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
Mims Metagenome or Environmental Checklist

Properties

  • Range: String

  • Cardinality: 0..1

  • Structured pattern: ^({PMID}|{DOI}|{URL})$

Examples

Value
https://mobio.com/media/wysiwyg/pdfs/protocols/12888.pdf

LinkML Source

name: nucl_acid_ext
description: A link to a literature reference, electronic resource or a standard operating
  procedure (SOP), that describes the material separation to recover the nucleic acid
  fraction from a sample
title: nucleic acid extraction
examples:
- value: https://mobio.com/media/wysiwyg/pdfs/protocols/12888.pdf
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
slot_uri: MIXS:0000037
alias: nucl_acid_ext
domain_of:
- MimsMisip
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
range: string
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL})$
  interpolated: true
  partial_match: true