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Term: geographic location (latitude and longitude) (lat_lon)

The geographical origin of the sample as defined by latitude and longitude. The values should be reported in decimal degrees and in WGS84 system

URI: MIXS:0000009

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use lat_lon.

Name Description Checklist/Extension
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
Mims Metagenome or Environmental Checklist
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
MigsVi Minimal Information about a Genome Sequence: virus Checklist
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
SymbiontAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
MimarksC Minimal Information about a Marker Specimen: specimen Checklist
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MimarksS Minimal Information about a Marker Specimen: survey Checklist
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension

Properties

  • Range: String
  • Cardinality: 1

  • Structured pattern: ^{lat} {lon}$

  • Regex pattern: ^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$

Examples

Value
50.586825 6.408977

Annotations

  • Expected_value: decimal degrees, limit to 8 decimal points

LinkML Source

name: lat_lon
annotations:
  Expected_value:
    tag: Expected_value
    value: decimal degrees,  limit to 8 decimal points
description: The geographical origin of the sample as defined by latitude and longitude.
  The values should be reported in decimal degrees and in WGS84 system
title: geographic location (latitude and longitude)
examples:
- value: 50.586825 6.408977
in_subset:
- environment
from_schema: https://w3id.org/mixs
keywords:
- geographic
- location
string_serialization: '{float} {float}'
slot_uri: MIXS:0000009
alias: lat_lon
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
- SymbiontAssociated
range: string
required: true
pattern: ^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$
structured_pattern:
  syntax: ^{lat} {lon}$
  interpolated: true
  partial_match: true