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Term: sample collection device (samp_collect_device)

The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094)

URI: MIXS:0000002

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use samp_collect_device.

Name Description Checklist/Extension
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
MigsVi Minimal Information about a Genome Sequence: virus Checklist
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
Mims Metagenome or Environmental Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
MimarksC Minimal Information about a Marker Sequence: specimen Checklist
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension

Properties

  • Range: String
  • Cardinality: 0..1

Annotations

  • Expected_value: device name

LinkML Source

name: samp_collect_device
annotations:
  Expected_value:
    tag: Expected_value
    value: device name
description: The device used to collect an environmental sample. This field accepts
  terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
  This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094)
title: sample collection device
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/mixs
keywords:
- device
- sample
string_serialization: '{termLabel} [{termID}]|{text}'
slot_uri: MIXS:0000002
alias: samp_collect_device
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodFoodProductionFacility
- FoodHumanFoods
range: string