Term: spike-in growth medium (spikein_growth_med)
A liquid or gel containing nutrients, salts, and other factors formulated to support the growth of microorganisms, cells, or plants (National Cancer Institute Thesaurus). A growth medium is a culture medium which has the disposition to encourage growth of particular bacteria to the exclusion of others in the same growth environment. In this case, list the culture medium used to propagate the spike-in bacteria during preparation of spike-in inoculum. This field accepts terms listed under microbiological culture medium (http://purl.obolibrary.org/obo/MICRO_0000067). If the proper descriptor is not listed please use text to describe the spike in growth media
URI: MIXS:0001169
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use spikein_growth_med.
Name | Description | Checklist/Extension |
---|---|---|
FoodAnimalAndAnimalFeed | A collection of terms appropriate when collecting samples and performing sequ... | Extension |
FoodFarmEnvironment | A collection of terms appropriate when collecting samples and performing sequ... | Extension |
FoodHumanFoods | A collection of terms appropriate when collecting samples and performing sequ... | Extension |
Properties
- Range: String
-
Cardinality: *
-
Structured pattern:
^{text}|({termLabel} \[{termID}\])$
-
Regex pattern:
^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
Examples
Value |
---|
LB broth [MCO:0000036] |
LinkML Source
name: spikein_growth_med
description: A liquid or gel containing nutrients, salts, and other factors formulated
to support the growth of microorganisms, cells, or plants (National Cancer Institute
Thesaurus). A growth medium is a culture medium which has the disposition to encourage
growth of particular bacteria to the exclusion of others in the same growth environment. In
this case, list the culture medium used to propagate the spike-in bacteria during
preparation of spike-in inoculum. This field accepts terms listed under microbiological
culture medium (http://purl.obolibrary.org/obo/MICRO_0000067). If the proper descriptor
is not listed please use text to describe the spike in growth media
title: spike-in growth medium
examples:
- value: LB broth [MCO:0000036]
from_schema: https://w3id.org/mixs
keywords:
- growth
- spike
slot_uri: MIXS:0001169
alias: spikein_growth_med
domain_of:
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
range: string
multivalued: true
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
structured_pattern:
syntax: ^{text}|({termLabel} \[{termID}\])$
interpolated: true
partial_match: true