Subset: NucleicAcidSequenceSource
URI: NucleicAcidSequenceSource
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/mixs-6-2-rc
Slots in subset
| Slot | Description |
|---|---|
| biotic_relationship | Description of relationship(s) between the subject organism and other organis... |
| encoded_traits | Should include key traits like antibiotic resistance or xenobiotic degradatio... |
| estimated_size | The estimated size of the genome prior to sequencing |
| extrachrom_elements | Do plasmids exist of significant phenotypic consequence (e |
| host_disease_stat | List of diseases with which the host has been diagnosed; can include multiple... |
| host_spec_range | The range and diversity of host species that an organism is capable of infect... |
| isol_growth_condt | Publication reference in the form of pubmed ID (pmid), digital object identif... |
| num_replicons | Reports the number of replicons in a nuclear genome of eukaryotes, in the gen... |
| pathogenicity | To what is the entity pathogenic |
| ploidy | The ploidy level of the genome (e |
| propagation | The type of reproduction from the parent stock |
| ref_biomaterial | Primary publication if isolated before genome publication; otherwise, primary... |
| rel_to_oxygen | Is this organism an aerobe, anaerobe? Please note that aerobic and anaerobic ... |
| samp_collect_device | The device used to collect an environmental sample |
| samp_collect_method | The method employed for collecting the sample |
| samp_mat_process | A brief description of any processing applied to the sample during or after r... |
| samp_size | The total amount or size (volume (ml), mass (g) or area (m2) ) of sample coll... |
| samp_vol_we_dna_ext | Volume (ml) or mass (g) of total collected sample processed for DNA extractio... |
| size_frac | Filtering pore size used in sample preparation |
| source_mat_id | A unique identifier assigned to a material sample (as defined by http://rs |
| source_uvig | Type of dataset from which the UViG was obtained |
| specific_host | Report the host's taxonomic name and/or NCBI taxonomy ID |
| subspecf_gen_lin | Information about the genetic distinctness of the sequenced organism below th... |
| trophic_level | Trophic levels are the feeding position in a food chain |
| virus_enrich_appr | List of approaches used to enrich the sample for viruses, if any |