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Term: library preparation protocols (sop_lib_preparation)

Citation(s) for the nucleic acid library preparation protocol.

URI: MIXS:0001393

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use sop_lib_preparation.

Name Description Checklist/Extension
Ancient A collection of terms appropriate when collecting samples and sequencing samp... Extension
MimsHostAssociatedAncient MIxS Data that comply with the Mims checklist, and HostAssociated and Ancient... -
MimsHumanAssociatedAncient MIxS Data that comply with the Mims checklist, and HumanAssociated and Ancien... -
MimsHumanOralAncient MIxS Data that comply with the Mims checklist, and HumanOral and Ancient exte... -
MimsHumanGutAncient MIxS Data that comply with the Mims checklist, and HumanGut and Ancient exten... -
MimsHumanSkinAncient MIxS Data that comply with the Mims checklist, and HumanSkin and Ancient exte... -
MimsSedimentAncient MIxS Data that comply with the Mims checklist, and Sediment and Ancient exten... -
MimsSoilAncient MIxS Data that comply with the Mims checklist, and Soil and Ancient extension... -
MimsPlantAssociatedAncient MIxS Data that comply with the Mims checklist, and PlantAssociated and Ancien... -

Properties

  • Range: String

  • Cardinality: *

  • Structured pattern: ^{PMID}|{DOI}|{URL}$

  • Regex pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$

Examples

Value
doi:10.1093/nar/gkr771

LinkML Source

name: sop_lib_preparation
description: Citation(s) for the nucleic acid library preparation protocol.
title: library preparation protocols
examples:
- value: doi:10.1093/nar/gkr771
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
slot_uri: MIXS:0001393
domain_of:
- Ancient
- MimsHostAssociatedAncient
- MimsHumanAssociatedAncient
- MimsHumanOralAncient
- MimsHumanGutAncient
- MimsHumanSkinAncient
- MimsSedimentAncient
- MimsSoilAncient
- MimsPlantAssociatedAncient
range: string
required: false
recommended: false
multivalued: true
pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
structured_pattern:
  syntax: ^{PMID}|{DOI}|{URL}$
  interpolated: true
  partial_match: true