Term: nucleic acid strandedness in library creation (lib_strandedness)
The strandedness of the original template nucleic acid molecules used for constructing the sequencing library
URI: MIXS:0001391
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use lib_strandedness.
| Name | Description | Checklist/Extension |
|---|---|---|
| Ancient | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| MimsHostAssociatedAncient | MIxS Data that comply with the Mims checklist, and HostAssociated and Ancient... | - |
| MimsHumanAssociatedAncient | MIxS Data that comply with the Mims checklist, and HumanAssociated and Ancien... | - |
| MimsHumanOralAncient | MIxS Data that comply with the Mims checklist, and HumanOral and Ancient exte... | - |
| MimsHumanGutAncient | MIxS Data that comply with the Mims checklist, and HumanGut and Ancient exten... | - |
| MimsHumanSkinAncient | MIxS Data that comply with the Mims checklist, and HumanSkin and Ancient exte... | - |
| MimsSedimentAncient | MIxS Data that comply with the Mims checklist, and Sediment and Ancient exten... | - |
| MimsSoilAncient | MIxS Data that comply with the Mims checklist, and Soil and Ancient extension... | - |
| MimsPlantAssociatedAncient | MIxS Data that comply with the Mims checklist, and PlantAssociated and Ancien... | - |
Properties
- Range: LibStrandEnum
- Cardinality: 1..* recommended
Examples
| Value |
|---|
| single |
| double |
Annotations
- Expected_value: nucleic acid library strandedness
LinkML Source
name: lib_strandedness
annotations:
Expected_value:
tag: Expected_value
value: nucleic acid library strandedness
description: The strandedness of the original template nucleic acid molecules used
for constructing the sequencing library
title: nucleic acid strandedness in library creation
examples:
- value: single
- value: double
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- library
- preparation
slot_uri: MIXS:0001391
domain_of:
- Ancient
- MimsHostAssociatedAncient
- MimsHumanAssociatedAncient
- MimsHumanOralAncient
- MimsHumanGutAncient
- MimsHumanSkinAncient
- MimsSedimentAncient
- MimsSoilAncient
- MimsPlantAssociatedAncient
range: LibStrandEnum
required: true
recommended: true
multivalued: true