Term: observed host symbionts (host_symbiont)
The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host. The sampled symbiont can have its own symbionts. For example, parasites may have hyperparasites (=parasites of the parasite)
URI: MIXS:0001298
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use host_symbiont.
| Name | Description | Checklist/Extension |
|---|---|---|
| Agriculture | A collection of terms appropriate when sequencing samples obtained in an agri... | Extension |
| HostAssociated | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| HumanAssociated | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| HumanGut | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| HumanOral | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| HumanSkin | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| HumanVaginal | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| PlantAssociated | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| SymbiontAssociated | A collection of terms appropriate when collecting samples and sequencing samp... | Extension |
| MimsHostAssociatedAncient | MIxS Data that comply with the Mims checklist, and HostAssociated and Ancient... | - |
| MimsHumanAssociatedAncient | MIxS Data that comply with the Mims checklist, and HumanAssociated and Ancien... | - |
| MimsHumanOralAncient | MIxS Data that comply with the Mims checklist, and HumanOral and Ancient exte... | - |
| MimsHumanGutAncient | MIxS Data that comply with the Mims checklist, and HumanGut and Ancient exten... | - |
| MimsHumanSkinAncient | MIxS Data that comply with the Mims checklist, and HumanSkin and Ancient exte... | - |
| MimsPlantAssociatedAncient | MIxS Data that comply with the Mims checklist, and PlantAssociated and Ancien... | - |
Properties
- Range: String
- Cardinality: *
Annotations
- Expected_value: species name or common name
LinkML Source
name: host_symbiont
annotations:
Expected_value:
tag: Expected_value
value: species name or common name
description: The taxonomic name of the organism(s) found living in mutualistic, commensalistic,
or parasitic symbiosis with the specific host. The sampled symbiont can have its
own symbionts. For example, parasites may have hyperparasites (=parasites of the
parasite)
title: observed host symbionts
from_schema: https://w3id.org/mixs
keywords:
- host
- host.
- observed
- symbiosis
slot_uri: MIXS:0001298
domain_of:
- Agriculture
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- PlantAssociated
- SymbiontAssociated
- MimsHostAssociatedAncient
- MimsHumanAssociatedAncient
- MimsHumanOralAncient
- MimsHumanGutAncient
- MimsHumanSkinAncient
- MimsPlantAssociatedAncient
range: string
multivalued: true