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Term: host age (host_age)

Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees

URI: MIXS:0000255

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use host_age.

Name Description Checklist/Extension
HumanVaginal A collection of terms appropriate when collecting samples and sequencing samp... Extension
SymbiontAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
HumanAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
HumanSkin A collection of terms appropriate when collecting samples and sequencing samp... Extension
PlantAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanOral A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanGut A collection of terms appropriate when collecting samples and sequencing samp... Extension
HostAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension

Properties

  • Range: String
  • Cardinality: 0..1

  • Structured pattern: ^{scientific_float}( *- *{scientific_float})? *{text}$

  • Regex pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)? *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$

Annotations

  • Preferred_unit: year, day, hour

LinkML Source

name: host_age
annotations:
  Preferred_unit:
    tag: Preferred_unit
    value: year, day, hour
description: Age of host at the time of sampling; relevant scale depends on species
  and study, e.g. Could be seconds for amoebae or centuries for trees
title: host age
from_schema: https://w3id.org/mixs
keywords:
- age
- host
- host.
slot_uri: MIXS:0000255
alias: host_age
domain_of:
- Agriculture
- FoodFarmEnvironment
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- PlantAssociated
- SymbiontAssociated
range: string
pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
  *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
  interpolated: true
  partial_match: true