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Term: sequence quality check (seq_quality_check)

Indicate if the sequence has been called by automatic systems (none) or undergone a manual editing procedure (e.g. by inspecting the raw data or chromatograms). Applied only for sequences that are not submitted to SRA,ENA or DRA

URI: MIXS:0000051

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use seq_quality_check.

Name Description Checklist/Extension
MimarksC Minimal Information about a Marker Sequence: specimen Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension

Properties

Examples

Value
none

Annotations

  • Expected_value: none or manually edited

LinkML Source

name: seq_quality_check
annotations:
  Expected_value:
    tag: Expected_value
    value: none or manually edited
description: Indicate if the sequence has been called by automatic systems (none)
  or undergone a manual editing procedure (e.g. by inspecting the raw data or chromatograms).
  Applied only for sequences that are not submitted to SRA,ENA or DRA
title: sequence quality check
examples:
- value: none
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- quality
slot_uri: MIXS:0000051
alias: seq_quality_check
domain_of:
- MimarksC
- MimarksS
- Agriculture
range: SeqQualityCheckEnum