Term: encoded traits (encoded_traits)

Should include key traits like antibiotic resistance or xenobiotic degradation phenotypes for plasmids, converting genes for phage

URI: MIXS:0000034

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use encoded_traits.

Name	Description	Checklist/Extension
MigsPl	Minimal Information about a Genome Sequence: plasmid	Checklist
MigsBa	Minimal Information about a Genome Sequence: cultured bacteria/archaea	Checklist
MigsVi	Minimal Information about a Genome Sequence: virus	Checklist

Properties

• Range: String
• Cardinality: 0..1

Examples

Value
beta-lactamase class A

Annotations

• Expected_value: for plasmid: antibiotic resistance; for phage: converting genes

LinkML Source

name: encoded_traits
annotations:
  Expected_value:
    tag: Expected_value
    value: 'for plasmid: antibiotic resistance; for phage: converting genes'
description: Should include key traits like antibiotic resistance or xenobiotic degradation
  phenotypes for plasmids, converting genes for phage
title: encoded traits
examples:
- value: beta-lactamase class A
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/mixs
string_serialization: '{text}'
slot_uri: MIXS:0000034
alias: encoded_traits
domain_of:
- MigsBa
- MigsPl
- MigsVi
range: string