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Slot: spikein_count

Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) should also be provided (example: total prokaryotes; 3.5e7 cells per ml; qPCR)

URI: MIXS:0001335

Properties

Examples

Value
total prokaryotes;3.5e7 colony forming units per milliliter;qPCR

Identifier and Mapping Information

Annotations

property value
Expected_value organism name;measurement value;enumeration

Schema Source

  • from schema: https://w3id.org/mixs-6-2-rc

LinkML Source

name: spikein_count
annotations:
  Expected_value:
    tag: Expected_value
    value: organism name;measurement value;enumeration
  Preferred_unit:
    tag: Preferred_unit
    value: colony forming units per milliliter; colony forming units per gram of dry
      weight
description: 'Total cell count of any organism (or group of organisms) per gram, volume
  or area of sample, should include name of organism followed by count. The method
  that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) should also be provided
  (example: total prokaryotes; 3.5e7 cells per ml; qPCR)'
title: spike-in organism count
examples:
- value: total prokaryotes;3.5e7 colony forming units per milliliter;qPCR
from_schema: https://w3id.org/mixs-6-2-rc
string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|other]'
slot_uri: MIXS:0001335
multivalued: false
alias: spikein_count
domain_of:
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
range: string
required: false
recommended: false