Slot: assembly_software

Tool(s) used for assembly, including version number and parameters

Properties

Range: String

Examples

Value
metaSPAdes;3.11.0;kmer set 21,33,55,77,99,121, default parameters otherwise

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/mixs-6-2-rc

LinkML Source

name: assembly_software
description: Tool(s) used for assembly, including version number and parameters
title: assembly software
examples:
- value: metaSPAdes;3.11.0;kmer set 21,33,55,77,99,121, default parameters otherwise
in_subset:
- sequencing
from_schema: https://w3id.org/mixs-6-2-rc
slot_uri: MIXS:0000058
multivalued: false
alias: assembly_software
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
range: string
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{software};{version};{parameters}$
  interpolated: true
  partial_match: true