Agriculture
agriculture
Combinations
- Agriculture
- AgricultureMIGSEukaryote [ MIGS eukaryote]
- AgricultureMIGSBacteria [ MIGS bacteria]
- AgricultureMIGSPlant [ MIGS plant]
- AgricultureMIGSVirus [ MIGS virus]
- AgricultureMIGSOrg [ MIGS org]
- AgricultureMIMS [ MIMS]
- AgricultureMIMARKSSpecimen [ MIMARKS specimen]
- AgricultureMIMARKSSurvey [ MIMARKS survey]
- AgricultureMISAG [ MISAG]
- AgricultureMIMAG [ MIMAG]
- AgricultureMIUVIG [ MIUVIG]
Slots
| MIxS ID | Name | Multiplicity | Description | Pattern | Info |
|---|---|---|---|---|---|
| MIXS:0000009 | lat_lon | 0..1 | The geographical origin of the sample as defined by latitude and longitude. The values should be reported in decimal degrees and in WGS84 system | None | . |
| MIXS:0000018 | depth | 0..1 | The vertical distance below local surface, e.g. for sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples. | None | . |
| MIXS:0000094 | alt | 0..1 | Altitude is a term used to identify heights of objects such as airplanes, space shuttles, rockets, atmospheric balloons and heights of places such as atmospheric layers and clouds. It is used to measure the height of an object which is above the earth's surface. In this context, the altitude measurement is the vertical distance between the earth's surface above sea level and the sampled position in the air | None | . |
| MIXS:0000093 | elev | 0..1 | Elevation of the sampling site is its height above a fixed reference point, most commonly the mean sea level. Elevation is mainly used when referring to points on the earth's surface, while altitude is used for points above the surface, such as an aircraft in flight or a spacecraft in orbit. | None | . |
| MIXS:0000113 | temp | 1..1 | Temperature of the sample at the time of sampling. | None | . |
| MIXS:0000010 | geo_loc_name | 0..1 | The geographical origin of the sample as defined by the country or sea name followed by specific region name. Country or sea names should be chosen from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology (http://purl.bioontology.org/ontology/GAZ) | None | . |
| MIXS:0000011 | collection_date | 0..1 | The time of sampling, either as an instance (single point in time) or interval. In case no exact time is available, the date/time can be right truncated i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10; 2008-01-23; 2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant | None | . |
| MIXS:0000012 | env_broad_scale | 0..1 | Report the major environmental system the sample or specimen came from. The system(s) identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. in the desert or a rainforest). We recommend using subclasses of EnvO’s biome class: http://purl.obolibrary.org/obo/ENVO_00000428. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS | None | . |
| MIXS:0000013 | env_local_scale | 0..1 | Report the entity or entities which are in the sample or specimen’s local vicinity and which you believe have significant causal influences on your sample or specimen. We recommend using EnvO terms which are of smaller spatial grain than your entry for env_broad_scale. Terms, such as anatomical sites, from other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS. | None | . |
| MIXS:0000014 | env_medium | 0..1 | Report the environmental material(s) immediately surrounding the sample or specimen at the time of sampling. We recommend using subclasses of 'environmental material' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS . Terms from other OBO ontologies are permissible as long as they reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree, a leaf, a table top). | None | . |
| MIXS:0000753 | oxy_stat_samp | 0..1 | Oxygenation status of sample. | None | . |
| MIXS:0000819 | pres_animal_insect | 0..1 | The type and number of animals or insects present in the sampling space. | None | . |
| MIXS:0001080 | cur_land_use | 0..1 | Present state of sample site | None | . |
| MIXS:0001081 | tillage | 0..* | Note method(s) used for tilling | None | . |
| MIXS:0001110 | farm_water_source | 0..* | Source of water used on the farm for irrigation of crops or watering of livestock. | None | . |
| MIXS:0001176 | water_source_shared | 0..* | Other users sharing access to the same water source. Multiple terms can be separated by one or more pipes. | None | . |
| MIXS:0001082 | horizon | 0..1 | Specific layer in the land area which measures parallel to the soil surface and possesses physical characteristics which differ from the layers above and beneath | None | . |
| MIXS:0001084 | profile_position | 0..1 | Cross-sectional position in the hillslope where sample was collected.sample area position in relation to surrounding areas | None | . |
| MIXS:0001085 | drainage_class | 0..1 | Drainage classification from a standard system such as the USDA system | None | . |
| MIXS:0000322 | sieving | 1..1 | Collection design of pooled samples and/or sieve size and amount of sample sieved | None | . |
| MIXS:0000325 | pool_dna_extracts | 1..* | Indicate whether multiple DNA extractions were mixed. If the answer yes, the number of extracts that were pooled should be given. | None | . |
| MIXS:0000318 | crop_rotation | 0..1 | Whether or not crop is rotated, and if yes, rotation schedule | None | . |
| MIXS:0001062 | root_med_ph | 0..1 | pH measurement of the culture rooting medium; e.g. 5.5. | None | . |
| MIXS:0001175 | water_pH | 0..1 | pH measurement of the sample, or liquid portion of sample, or aqueous phase of the fluid. | None | . |
| MIXS:0000211 | porosity | 0..1 | Porosity of deposited sediment is volume of voids divided by the total volume of sample | None | . |
| MIXS:0000644 | annual_precpt | 0..1 | The average of all annual precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps. | None | . |
| MIXS:0000642 | annual_temp | 0..1 | Mean annual temperature | None | . |
| MIXS:0000255 | host_age | 1..1 | Age of host at the time of sampling; relevant scale depends on species and study, e.g. Could be seconds for amoebae or centuries for trees | None | . |
| MIXS:0000257 | host_dry_mass | 0..1 | Measurement of dry mass | None | . |
| MIXS:0000264 | host_height | 1..1 | The height of subject | None | . |
| MIXS:0000256 | host_length | 1..1 | The length of subject | None | . |
| MIXS:0000263 | host_tot_mass | 1..1 | Total mass of the host at collection, the unit depends on host | None | . |
| MIXS:0000100 | humidity | 0..1 | Amount of water vapour in the air, at the time of sampling | None | . |
| MIXS:0000650 | microbial_biomass | 1..1 | The part of the organic matter in the soil that constitutes living microorganisms smaller than 5-10 micrometer. If you keep this, you would need to have correction factors used for conversion to the final units | None | . |
| MIXS:0001296 | photosynt_activ | 0..* | Measurement of photosythetic activity (i.e. leaf gas exchange / chlorophyll fluorescence emissions / reflectance / transpiration) Please also include the term method term detailing the method of activity measurement. | None | . |
| MIXS:0000110 | samp_stor_temp | 0..1 | Temperature at which sample was stored, e.g. -80 degree Celsius. | None | . |
| MIXS:0001148 | season_humidity | 0..1 | Average humidity of the region throughout the growing season. | None | . |
| MIXS:0000645 | season_precpt | 0..1 | The average of all seasonal precipitation values known, or an estimated equivalent value derived by such methods as regional indexes or Isohyetal maps. | None | . |
| MIXS:0000643 | season_temp | 0..1 | Mean seasonal temperature | None | . |
| MIXS:0000735 | size_frac_low | 0..1 | Refers to the mesh/pore size used to pre-filter/pre-sort the sample. Materials larger than the size threshold are excluded from the sample | None | . |
| MIXS:0000736 | size_frac_up | 0..1 | Refers to the mesh/pore size used to retain the sample. Materials smaller than the size threshold are excluded from the sample | None | . |
| MIXS:0000647 | slope_aspect | 0..1 | The direction a slope faces. While looking down a slope use a compass to record the direction you are facing (direction or degrees); e.g., nw or 315 degrees. This measure provides an indication of sun and wind exposure that will influence soil temperature and evapotranspiration. | None | . |
| MIXS:0000646 | slope_gradient | 0..1 | Commonly called 'slope'. The angle between ground surface and a horizontal line (in percent). This is the direction that overland water would flow. This measure is usually taken with a hand level meter or clinometer | None | . |
| MIXS:0000018 | soil_depth | 0..1 | The vertical distance below local surface, e.g. For sediment or soil samples depth is measured from sediment or soil surface, respectively. Depth can be reported as an interval for subsurface samples. | None | . |
| MIXS:0000112 | solar_irradiance | 0..1 | The amount of solar energy that arrives at a specific area of a surface during a specific time interval | None | . |
| MIXS:0000335 | texture | 0..1 | The relative proportion of different grain sizes of mineral particles in a soil, as described using a standard system; express as % sand (50 um to 2 mm), silt (2 um to 50 um), and clay (<2 um) with textural name (e.g., silty clay loam) optional. | None | . |
| MIXS:0000525 | tot_car | 0..1 | Total carbon content | None | . |
| MIXS:0000102 | tot_nitro | 0..1 | Total nitrogen concentration of water samples, calculated by: total nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured without filtering, reported as nitrogen | None | . |
| MIXS:0000533 | tot_org_carb | 0..1 | Definition for soil: total organic carbon content of the soil, definition otherwise: total organic carbon content | None | . |
| MIXS:0000689 | tot_phos | 0..1 | Total amount or concentration of phosphate | None | . |
| MIXS:0000590 | water_temp_regm | 0..* | Information about treatment involving an exposure to water with varying degree of temperature, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens | None | . |
| MIXS:0000591 | watering_regm | 0..* | Information about treatment involving an exposure to watering frequencies, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens | None | . |
| MIXS:0001056 | ph_regm | 0..* | Information about treatment involving exposure of plants to varying levels of ph of the growth media, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimen | None | . |
| MIXS:0001116 | crop_yield | 0..1 | Amount of crop produced per unit or area of land. | None | . |
| MIXS:0001163 | soil_temp | 0..* | Temperature of soil at the time of sampling. | None | . |
| MIXS:0000250 | host_taxid | 1..1 | NCBI taxon id of the host. | None | . |
| MIXS:0001147 | lot_number | 0..* | A distinctive alpha-numeric identification code assigned by the manufacturer or distributor to a specific quantity of manufactured material or product within a batch. Synonym: Batch Number. The submitter should provide lot number of the item followed by the item name for which the lot number was provided. | None | . |
| MIXS:0000116 | samp_store_dur | 1..1 | Duration for which the sample was stored | None | . |
| MIXS:0000336 | texture_meth | 0..1 | Reference or method used in determining soil texture. | None | . |
| MIXS:0001177 | enrichment_protocol | 0..1 | The microbiological workflow or protocol followed to test for the presence or enumeration of the target microbial analyte(s). Please provide a PubMed or DOI reference for published protocols. | None | . |
| MIXS:0000859 | genetic_mod | 0..1 | Genetic modifications of the genome of an organism, which may occur naturally by spontaneous mutation, or be introduced by some experimental means, e.g. specification of a transgene or the gene knocked-out or details of transient transfection. | None | . |
| MIXS:0001336 | photosynt_activ_meth | 0..* | Reference or method used in measurement of photosythetic activity | None | . |
| MIXS:0001225 | samp_collect_method | 0..1 | The method employed for collecting the sample. | None | . |
| MIXS:0000314 | cur_vegetation_meth | 0..1 | Reference or method used in vegetation classification | None | . |
| MIXS:0000343 | heavy_metals_meth | 0..1 | Reference or method used in determining heavy metals | None | . |
| MIXS:0000321 | horizon_meth | 0..1 | Reference or method used in determining the horizon | None | . |
| MIXS:0000329 | link_class_info | 0..1 | Link to digitized soil maps or other soil classification information | None | . |
| MIXS:0000328 | link_climate_info | 0..1 | Link to climate resource | None | . |
| MIXS:0000331 | local_class_meth | 0..1 | Reference or method used in determining the local soil classification | None | . |
| MIXS:0000339 | microbial_biomass_meth | 1..1 | Reference or method used in determining microbial biomass | None | . |
| MIXS:0001106 | ph_meth | 0..1 | Reference or method used in determining ph | None | . |
| MIXS:0000316 | previous_land_use_meth | 0..1 | Reference or method used in determining previous land use and dates | None | . |
| MIXS:0000334 | soil_type_meth | 1..1 | Reference or method used in determining soil series name or other lower-level classification | None | . |
| MIXS:0000338 | tot_n_meth | 0..1 | Reference or method used in determining the total nitrogen | None | . |
| MIXS:0000337 | tot_org_c_meth | 0..1 | Reference or method used in determining total organic carbon | None | . |
| MIXS:0001318 | host_subspecf_genlin | 0..* | Information about the genetic distinctness of the host organism below the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar, or any relevant genetic typing schemes like Group I plasmid. Subspecies should not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage name and the lineage rank separated by a colon, e.g., biovar:abc123. | None | . |
| MIXS:0000058 | assembly_quality | 0..1 | Tool(s) used for assembly, including version number and parameters | None | . |
| MIXS:0001083 | fao_class | 0..1 | Soil classification from the FAO World Reference Database for Soil Resources. The list can be found at http://www.fao.org/nr/land/sols/soil/wrb-soil-maps/reference-groups | None | . |
| MIXS:0000874 | host_phenotype | 1..1 | Phenotype of human or other host. For phenotypic quality ontology (pato) (v 2018-03-27) terms, please see http://purl.bioontology.org/ontology/pato. For Human Phenotype Ontology (HP) (v 2018-06-13) please see http://purl.bioontology.org/ontology/HP. | None | . |
| MIXS:0001115 | anim_water_method | 0..* | Description of the equipment or method used to distribute water to livestock. This field accepts termed listed under water delivery equipment (http://opendata.inra.fr/EOL/EOL_0001653). Multiple terms can be separated by pipes. | None | . |
| MIXS:0001126 | farm_equip | 0..* | List of equipment used for planting, fertilization, harvesting, irrigation, land levelling, residue management, weeding or transplanting during the growing season. This field accepts terms listed under agricultural implement (http://purl.obolibrary.org/obo/AGRO_00000416). Multiple terms can be separated by pipes. | None | . |
| MIXS:0001127 | fertilizer_admin | 0..1 | Type of fertilizer or amendment added to the soil or water for the purpose of improving substrate health and quality for plant growth. This field accepts terms listed under agronomic fertilizer (http://purl.obolibrary.org/obo/AGRO_00002062). Multiple terms may apply and can be separated by pipes, listing in reverse chronological order. | None | . |
| MIXS:0001211 | food_prod | 0..* | Descriptors of the food production system or of the agricultural environment and growing conditions related to the farm production system, such as wild caught, organic, free-range, industrial, dairy, beef, domestic or cultivated food production. This field accepts terms listed under food production (http://purl.obolibrary.org/obo/FOODON_03530206). Multiple terms may apply and can be separated by pipes. | None | . |
| MIXS:0001137 | food_trav_mode | 0..* | A descriptor for the method of movement of food commodity along the food distribution system. This field accepts terms listed under travel mode (http://purl.obolibrary.org/obo/GENEPIO_0001064). If the proper descrptor is not listed please use text to describe the mode of travel. Multiple terms can be separated by one or more pipes. | None | . |
| MIXS:0001060 | plant_struc | 0..1 | Name of plant structure the sample was obtained from; for Plant Ontology (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO, e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex of it can be recorded here. | None | . |
| MIXS:0001111 | plant_water_method | 0..1 | Description of the equipment or method used to distribute water to crops. This field accepts termed listed under irrigation process (http://purl.obolibrary.org/obo/AGRO_00000006). Multiple terms can be separated by pipes. | None | . |
| MIXS:0000829 | season | 0..1 | The season when sampling occurred. Any of the four periods into which the year is divided by the equinoxes and solstices. This field accepts terms listed under season (http://purl.obolibrary.org/obo/NCIT_C94729). | None | . |
| MIXS:0001057 | plant_growth_med | 0..1 | Specification of the media for growing the plants or tissue cultured samples, e.g. soil, aeroponic, hydroponic, in vitro solid culture medium, in vitro liquid culture medium. Recommended value is a specific value from EO:plant growth medium (follow this link for terms http://purl.obolibrary.org/obo/EO_0007147) or other controlled vocabulary | None | . |
| MIXS:0000751 | chem_administration | 1..* | List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi | None | . |
| MIXS:0001170 | spikein_strain | 0..* | Taxonomic information about the spike-in organism(s) at the strain level. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250). This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy. Multiple terms can be separated by pipes. | None | . |
| MIXS:0001121 | adjacent_environment | 0..* | Description of the environmental system or features that are adjacent to the sampling site. This field accepts terms under ecosystem (http://purl.obolibrary.org/obo/ENVO_01001110) and human construction (http://purl.obolibrary.org/obo/ENVO_00000070). Multiple terms can be separated by pipes. | None | . |
| MIXS:0000247 | ances_data | 0..1 | Information about either pedigree or other ancestral information description (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A x B) x B] x B) | None | . |
| MIXS:0000312 | cur_vegetation | 0..1 | Vegetation classification from one or more standard classification systems, or agricultural crop | None | . |
| MIXS:0001184 | Food_Product_type | 0..1 | new food product categories and food products themselves | None | . |
| MIXS:0001139 | Food_source | 1..1 | Type of plant or animal from which the food product or its major ingredient is derived or a chemical food source [FDA CFSAN 1995]. | None | . |
| MIXS:0000248 | host_common_name | 1..1 | Common name of the host. | None | . |
| MIXS:0000365 | host_genotype | 1..1 | Observed genotype | None | . |
| MIXS:0000251 | host_life_stage | 1..1 | Description of life stage of host | None | . |
| MIXS:0001298 | host_symbiont | 0..* | The taxonomic name of the organism(s) found living in mutualistic, commensalistic, or parasitic symbiosis with the specific host. | None | . |
| MIXS:0001145 | library_prep_kit | 0..1 | Packaged kits (containing adapters, indexes, enzymes, buffers etc.), tailored for specific sequencing workflows, which allow the simplified preparation of sequencing-ready libraries for small genomes, amplicons, and plasmids. | None | . |
| MIXS:0000330 | local_class | 0..1 | Soil classification based on local soil classification system | None | . |
| MIXS:0001058 | plant_product | 0..1 | Substance produced by the plant, where the sample was obtained from | None | . |
| MIXS:0000002 | samp_collect_device | 1..1 | The device used to collect an environmental sample. This field accepts terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO). This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094). | None | . |
| MIXS:0000755 | samp_store_loc | 1..1 | Location at which sample was stored, usually name of a specific freezer/room | None | . |
| MIXS:0001156 | sequencing_location | 0..1 | The location the sequencing run was performed. Indicate the name of the lab or core facility where samples were sequenced. | None | . |
| MIXS:0000332 | soil_type | 1..* | Description of the soil type or classification. This field accepts terms under soil (http://purl.obolibrary.org/obo/ENVO_00001998). Multiple terms can be separated by pipes. | None | . |
| MIXS:0000752 | misc_param | 0..* | Any other measurement performed or parameter collected, that is not listed here | None | . |
| MIXS:0000577 | root_med_carbon | 0..1 | Source of organic carbon in the culture rooting medium; e.g. sucrose. | None | . |
| MIXS:0000578 | root_med_macronutr | 0..1 | Measurement of the culture rooting medium macronutrients (N,P, K, Ca, Mg, S); e.g. KH2PO4 (170 mg/L). | None | . |
| MIXS:0000103 | organism_count | 0..* | Total cell count of any organism (or group of organisms) per gram, volume or area of sample, should include name of organism followed by count. The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr). | None | . |
| MIXS:0000557 | fungicide_regm | 0..* | Information about treatment involving use of fungicides; should include the name of fungicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple fungicide regimens | None | . |
| MIXS:0000558 | gaseous_environment | 0..* | Use of conditions with differing gaseous environments; should include the name of gaseous compound, amount administered, treatment duration, interval and total experimental duration; can include multiple gaseous environment regimens | None | . |
| MIXS:0000561 | herbicide_regm | 0..* | Information about treatment involving use of herbicides; information about treatment involving use of growth hormones; should include the name of herbicide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens | None | . |
| MIXS:0000571 | non_mineral_nutr_regm | 0..* | Information about treatment involving the exposure of plant to non-mineral nutrient such as oxygen, hydrogen or carbon; should include the name of non-mineral nutrient, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple non-mineral nutrient regimens | None | . |
| MIXS:0000573 | pesticide_regm | 0..* | Information about treatment involving use of insecticides; should include the name of pesticide, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple pesticide regimens | None | . |
| MIXS:0000582 | salt_regm | 0..* | Information about treatment involving use of salts as supplement to liquid and soil growth media; should include the name of salt, amount administered, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple salt regimens | None | . |
| MIXS:0000639 | agrochem_addition | 0..* | Addition of fertilizers, pesticides, etc. - amount and time of applications | None | . |
| MIXS:0000754 | perturbation | 0..* | Type of perturbation, e.g. chemical administration, physical disturbance, etc., coupled with perturbation regimen including how many times the perturbation was repeated, how long each perturbation lasted, and the start and end time of the entire perturbation period; can include multiple perturbation types | None | . |
| MIXS:0000327 | store_cond | 1..1 | Explain how and for how long the soil sample was stored before DNA extraction (fresh/frozen/other). | None | . |
| MIXS:0001040 | climate_environment | 0..* | Treatment involving an exposure to a particular climate; treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple climates | None | . |
| MIXS:0001068 | season_environment | 0..* | Treatment involving an exposure to a particular season (e.g. Winter, summer, rabi, rainy etc.), treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment | None | . |
| MIXS:0001069 | standing_water_regm | 0..* | Treatment involving an exposure to standing water during a plant's life span, types can be flood water or standing water, treatment regimen including how many times the treatment was repeated, how long each treatment lasted, and the start and end time of the entire treatment; can include multiple regimens | None | . |
| MIXS:0000315 | previous_land_use | 0..1 | Previous land use and dates | None | . |
| MIXS:0001138 | food_trav_vehic | 0..* | A descriptor for the mobile machine which is used to transport food commodities along the food distribution system. This field accepts terms listed under vehicle (http://purl.obolibrary.org/obo/ENVO_01000604). If the proper descrptor is not listed please use text to describe the mode of travel. Multiple terms can be separated by one or more pipes. | None | . |
| MIXS:0000320 | extreme_event | 0..1 | Unusual physical events that may have affected microbial populations | None | . |
| MIXS:0001086 | fire | 0..1 | Historical and/or physical evidence of fire | None | . |
| MIXS:0000319 | flooding | 0..1 | Historical and/or physical evidence of flooding | None | . |
| MIXS:0000091 | url | 0..* | A related resource that is referenced, cited, or otherwise associated to the sequence. | None | . |
| MIXS:0001082 | soil_horizon | 0..1 | Specific layer in the land area which measures parallel to the soil surface and possesses physical characteristics which differ from the layers above and beneath | None | . |
| MIXS:0001181 | cult_isol_date | 0..1 | A culture isolation date is a date-time entity marking the end of a process in which a sample yields a positive result for the target microbial analyte(s) in the form of an isolated colony or colonies. | None | . |
| MIXS:0001124 | farm_equip_san | 0..* | Method used to sanitize growing and harvesting equipment. This can including type and concentration of sanitizing solution. Multiple terms can be separated by one or more pipes. | None | . |
| MIXS:0001123 | farm_equip_shared | 0..* | List of planting, growing or harvesting equipment shared with other farms. This field accepts terms listed under agricultural implement (http://purl.obolibrary.org/obo/AGRO_00000416). Multiple terms can be separated by pipes. | None | . |
| MIXS:0001133 | food_harvest_proc | 0..* | A harvesting process is a process which takes in some food material from an individual or community of plant or animal organisms in a given context and time, and outputs a precursor or consumable food product. This may include a part of an organism or the whole, and may involve killing the organism. | None | . |
| MIXS:0001161 | rel_location | 0..1 | Location of sampled soil to other parts of the farm e.g. under crop plant, near irrigation ditch, from the dirt road. | None | . |
| MIXS:0001153 | samp_pooling | 0..* | Physical combination of several instances of like material, e.g. RNA extracted from samples or dishes of cell cultures into one big aliquot of cells. Please provide a short description of the samples that were pooled. | None | . |
| MIXS:0001158 | soil_conductivity | 0..1 | Conductivity of soil at time of sampling. | None | . |
| MIXS:0001159 | soil_cover | 0..1 | Description of the material covering the sampled soil. This field accepts terms under ENVO:00010483, environmental material. | None | . |
| MIXS:0001160 | soil_pH | 0..1 | The pH of soil at time of sampling. | None | . |