Extension: water (Water)

A collection of terms appropriate when collecting samples and sequencing water samples obtained from any aquatic environment.

Terms

MIXS ID	Name	Cardinality and Range	Description
MIXS:0001107	samp_name	1 String	A local identifier or name that for the material sample used for extracting n...
MIXS:0000092	project_name	1 String	Name of the project within which the sequencing was organized
MIXS:0000018	depth	1 String	The vertical distance below local surface
MIXS:0000093	elev	0..1 recommended String	Elevation of the sampling site is its height above a fixed reference point, m...
MIXS:0000421	alkalinity	0..1 String	Alkalinity, the ability of a solution to neutralize acids to the equivalence ...
MIXS:0000298	alkalinity_method	0..1 String	Method used for alkalinity measurement
MIXS:0000490	alkyl_diethers	0..1 String	Concentration of alkyl diethers
MIXS:0000172	aminopept_act	0..1 String	Measurement of aminopeptidase activity
MIXS:0000427	ammonium	0..1 String	Concentration of ammonium in the sample
MIXS:0001097	atmospheric_data	* String	Measurement of atmospheric data; can include multiple data
MIXS:0000173	bacteria_carb_prod	0..1 String	Measurement of bacterial carbon production
MIXS:0000683	bac_prod	0..1 String	Bacterial production in the water column measured by isotope uptake
MIXS:0000684	bac_resp	0..1 String	Measurement of bacterial respiration in the water column
MIXS:0000174	biomass	* String	Amount of biomass; should include the name for the part of biomass measured, ...
MIXS:0000175	bishomohopanol	0..1 String	Concentration of bishomohopanol
MIXS:0000176	bromide	0..1 String	Concentration of bromide
MIXS:0000432	calcium	0..1 String	Concentration of calcium in the sample
MIXS:0000310	carb_nitro_ratio	0..1 Float	Ratio of amount or concentrations of carbon to nitrogen
MIXS:0000751	chem_administration	* String	List of chemical compounds administered to the host or site where sampling oc...
MIXS:0000429	chloride	0..1 String	Concentration of chloride in the sample
MIXS:0000177	chlorophyll	0..1 String	Concentration of chlorophyll
MIXS:0000692	conduc	0..1 String	Electrical conductivity of water
MIXS:0000435	density	0..1 String	Density of the sample, which is its mass per unit volume (aka volumetric mass...
MIXS:0000178	diether_lipids	* String	Concentration of diether lipids; can include multiple types of diether lipids
MIXS:0000436	diss_carb_dioxide	0..1 String	Concentration of dissolved carbon dioxide in the sample or liquid portion of ...
MIXS:0000179	diss_hydrogen	0..1 String	Concentration of dissolved hydrogen
MIXS:0000434	diss_inorg_carb	0..1 String	Dissolved inorganic carbon concentration in the sample, typically measured af...
MIXS:0000698	diss_inorg_nitro	0..1 String	Concentration of dissolved inorganic nitrogen
MIXS:0000106	diss_inorg_phosp	0..1 String	Concentration of dissolved inorganic phosphorus in the sample
MIXS:0000433	diss_org_carb	0..1 String	Concentration of dissolved organic carbon in the sample, liquid portion of th...
MIXS:0000162	diss_org_nitro	0..1 String	Dissolved organic nitrogen concentration measured as; total dissolved nitroge...
MIXS:0000119	diss_oxygen	0..1 String	Concentration of dissolved oxygen
MIXS:0000703	down_par	0..1 String	Visible waveband radiance and irradiance measurements in the water column
MIXS:0000704	fluor	0..1 String	Raw or converted fluorescence of water
MIXS:0000137	glucosidase_act	0..1 String	Measurement of glucosidase activity
MIXS:0000706	light_intensity	0..1 String	Measurement of light intensity
MIXS:0000431	magnesium	0..1 String	Concentration of magnesium in the sample
MIXS:0000498	mean_frict_vel	0..1 String	Measurement of mean friction velocity
MIXS:0000502	mean_peak_frict_vel	0..1 String	Measurement of mean peak friction velocity
MIXS:0000752	misc_param	* String	Any other measurement performed or parameter collected, that is not listed he...
MIXS:0000503	n_alkanes	* String	Concentration of n-alkanes; can include multiple n-alkanes
MIXS:0000425	nitrate	0..1 String	Concentration of nitrate in the sample
MIXS:0000426	nitrite	0..1 String	Concentration of nitrite in the sample
MIXS:0000504	nitro	0..1 String	Concentration of nitrogen (total)
MIXS:0000508	org_carb	0..1 String	Concentration of organic carbon
MIXS:0000204	org_matter	0..1 String	Concentration of organic matter
MIXS:0000205	org_nitro	0..1 String	Concentration of organic nitrogen
MIXS:0000103	organism_count	* String	Total cell count of any organism (or group of organisms) per gram, volume or ...
MIXS:0000753	oxy_stat_samp	0..1 OxyStatSampEnum	Oxygenation status of sample
MIXS:0001001	ph	0..1 Float	Ph measurement of the sample, or liquid portion of sample, or aqueous phase o...
MIXS:0000515	part_org_carb	0..1 String	Concentration of particulate organic carbon
MIXS:0000719	part_org_nitro	0..1 String	Concentration of particulate organic nitrogen
MIXS:0000754	perturbation	* String	Type of perturbation, e
MIXS:0000516	petroleum_hydrocarb	0..1 String	Concentration of petroleum hydrocarbon
MIXS:0000180	phaeopigments	* String	Concentration of phaeopigments; can include multiple phaeopigments
MIXS:0000505	phosphate	0..1 String	Concentration of phosphate
MIXS:0000181	phosplipid_fatt_acid	* String	Concentration of phospholipid fatty acids; can include multiple values
MIXS:0000725	photon_flux	0..1 String	Measurement of photon flux
MIXS:0000430	potassium	0..1 String	Concentration of potassium in the sample
MIXS:0000412	pressure	0..1 String	Pressure to which the sample is subject to, in atmospheres
MIXS:0000728	primary_prod	0..1 String	Measurement of primary production, generally measured as isotope uptake
MIXS:0000182	redox_potential	0..1 String	Redox potential, measured relative to a hydrogen cell, indicating oxidation o...
MIXS:0000183	salinity	0..1 String	The total concentration of all dissolved salts in a liquid or solid sample
MIXS:0000116	samp_store_dur	0..1 String	Duration for which the sample was stored
MIXS:0000755	samp_store_loc	0..1 String	Location at which sample was stored, usually name of a specific freezer/room
MIXS:0000110	samp_store_temp	0..1 String	Temperature at which sample was stored, e
MIXS:0000111	samp_vol_we_dna_ext	0..1 String	Volume (ml) or mass (g) of total collected sample processed for DNA extractio...
MIXS:0000184	silicate	0..1 String	Concentration of silicate
MIXS:0000735	size_frac_low	0..1 String	Refers to the mesh/pore size used to pre-filter/pre-sort the sample
MIXS:0000736	size_frac_up	0..1 String	Mesh or pore size of the device used to retain the sample
MIXS:0000428	sodium	0..1 String	Sodium concentration in the sample
MIXS:0000738	soluble_react_phosp	0..1 String	Concentration of soluble reactive phosphorus
MIXS:0000423	sulfate	0..1 String	Concentration of sulfate in the sample
MIXS:0000424	sulfide	0..1 String	Concentration of sulfide in the sample
MIXS:0000741	suspend_part_matter	0..1 String	Concentration of suspended particulate matter
MIXS:0000113	temp	0..1 String	Temperature of the sample at the time of sampling
MIXS:0000750	tidal_stage	0..1 TidalStageEnum	Stage of tide
MIXS:0000634	tot_depth_water_col	0..1 String	Measurement of total depth of water column
MIXS:0000744	tot_diss_nitro	0..1 String	Total dissolved nitrogen concentration, reported as nitrogen, measured by: to...
MIXS:0000745	tot_inorg_nitro	0..1 String	Total inorganic nitrogen content
MIXS:0000102	tot_nitro	0..1 String	Total nitrogen concentration of water samples, calculated by: total nitrogen ...
MIXS:0000747	tot_part_carb	0..1 String	Total particulate carbon content
MIXS:0000117	tot_phosp	0..1 String	Total phosphorus concentration in the sample, calculated by: total phosphorus...
MIXS:0000191	turbidity	0..1 String	Measure of the amount of cloudiness or haziness in water caused by individual...
MIXS:0000203	water_current	0..1 String	Measurement of magnitude and direction of flow within a fluid

Aliases

• MIxS-water

See Also

• https://www.vliz.be/projects/assembleplus/research/ocean-sampling-day-2018.html

Annotations

• use_cases: sea or river water, global ocean sampling day

LinkML Source

Direct

name: Water
annotations:
  use_cases:
    tag: use_cases
    value: sea or river water, global ocean sampling day
description: A collection of terms appropriate when collecting samples and sequencing
  water samples  obtained from any aquatic environment.
title: water
from_schema: https://w3id.org/mixs
see_also:
- https://www.vliz.be/projects/assembleplus/research/ocean-sampling-day-2018.html
aliases:
- MIxS-water
is_a: Extension
slots:
- samp_name
- project_name
- depth
- elev
- alkalinity
- alkalinity_method
- alkyl_diethers
- aminopept_act
- ammonium
- atmospheric_data
- bacteria_carb_prod
- bac_prod
- bac_resp
- biomass
- bishomohopanol
- bromide
- calcium
- carb_nitro_ratio
- chem_administration
- chloride
- chlorophyll
- conduc
- density
- diether_lipids
- diss_carb_dioxide
- diss_hydrogen
- diss_inorg_carb
- diss_inorg_nitro
- diss_inorg_phosp
- diss_org_carb
- diss_org_nitro
- diss_oxygen
- down_par
- fluor
- glucosidase_act
- light_intensity
- magnesium
- mean_frict_vel
- mean_peak_frict_vel
- misc_param
- n_alkanes
- nitrate
- nitrite
- nitro
- org_carb
- org_matter
- org_nitro
- organism_count
- oxy_stat_samp
- ph
- part_org_carb
- part_org_nitro
- perturbation
- petroleum_hydrocarb
- phaeopigments
- phosphate
- phosplipid_fatt_acid
- photon_flux
- potassium
- pressure
- primary_prod
- redox_potential
- salinity
- samp_store_dur
- samp_store_loc
- samp_store_temp
- samp_vol_we_dna_ext
- silicate
- size_frac_low
- size_frac_up
- sodium
- soluble_react_phosp
- sulfate
- sulfide
- suspend_part_matter
- temp
- tidal_stage
- tot_depth_water_col
- tot_diss_nitro
- tot_inorg_nitro
- tot_nitro
- tot_part_carb
- tot_phosp
- turbidity
- water_current
slot_usage:
  depth:
    name: depth
    examples:
    - value: 10 meter
    required: true
  elev:
    name: elev
    recommended: true
  organism_count:
    name: organism_count
    examples:
    - value: total prokaryotes;3.5e7 cells per milliliter;qPCR
class_uri: MIXS:0016014

Induced

name: Water
annotations:
  use_cases:
    tag: use_cases
    value: sea or river water, global ocean sampling day
description: A collection of terms appropriate when collecting samples and sequencing
  water samples  obtained from any aquatic environment.
title: water
from_schema: https://w3id.org/mixs
see_also:
- https://www.vliz.be/projects/assembleplus/research/ocean-sampling-day-2018.html
aliases:
- MIxS-water
is_a: Extension
slot_usage:
  depth:
    name: depth
    examples:
    - value: 10 meter
    required: true
  elev:
    name: elev
    recommended: true
  organism_count:
    name: organism_count
    examples:
    - value: total prokaryotes;3.5e7 cells per milliliter;qPCR
attributes:
  samp_name:
    name: samp_name
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: ''
    description: A local identifier or name that for the material sample used for
      extracting nucleic acids, and subsequent sequencing. It can refer either to
      the original material collected or to any derived sub-samples. It can have any
      format, but we suggest that you make it concise, unique and consistent within
      your lab, and as informative as possible. INSDC requires every sample name from
      a single Submitter to be unique. Use of a globally unique identifier for the
      field source_mat_id is recommended in addition to sample_name
    title: sample name
    examples:
    - value: ISDsoil1
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - sample
    slot_uri: MIXS:0001107
    alias: samp_name
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
  project_name:
    name: project_name
    description: Name of the project within which the sequencing was organized
    title: project name
    examples:
    - value: Forest soil metagenome
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - project
    slot_uri: MIXS:0000092
    alias: project_name
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
  depth:
    name: depth
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: The vertical distance below local surface. For sediment or soil samples
      depth is measured from sediment or soil surface, respectively. Depth can be
      reported as an interval for subsurface samples
    title: depth
    examples:
    - value: 10 meter
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - depth
    slot_uri: MIXS:0000018
    alias: depth
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodFarmEnvironment
    - HostAssociated
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  elev:
    name: elev
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: Elevation of the sampling site is its height above a fixed reference
      point, most commonly the mean sea level. Elevation is mainly used when referring
      to points on the earth's surface, while altitude is used for points above the
      surface, such as an aircraft in flight or a spacecraft in orbit
    title: elevation
    examples:
    - value: 100 meter
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - elevation
    slot_uri: MIXS:0000093
    alias: elev
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - HostAssociated
    - HydrocarbonResourcesCores
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - Water
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  alkalinity:
    name: alkalinity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milliequivalent per liter, milligram per liter
    description: Alkalinity, the ability of a solution to neutralize acids to the
      equivalence point of carbonate or bicarbonate
    title: alkalinity
    examples:
    - value: 50 milligram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - alkalinity
    slot_uri: MIXS:0000421
    alias: alkalinity
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  alkalinity_method:
    name: alkalinity_method
    description: Method used for alkalinity measurement
    title: alkalinity method
    examples:
    - value: titration
    from_schema: https://w3id.org/mixs
    keywords:
    - alkalinity
    - method
    slot_uri: MIXS:0000298
    alias: alkalinity_method
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - Water
    range: string
  alkyl_diethers:
    name: alkyl_diethers
    description: Concentration of alkyl diethers
    title: alkyl diethers
    examples:
    - value: 0.005 mole per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000490
    alias: alkyl_diethers
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  aminopept_act:
    name: aminopept_act
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: mole per liter per hour
    description: Measurement of aminopeptidase activity
    title: aminopeptidase activity
    examples:
    - value: 0.269 mole per liter per hour
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000172
    alias: aminopept_act
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  ammonium:
    name: ammonium
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of ammonium in the sample
    title: ammonium
    examples:
    - value: 1.5 milligram per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000427
    alias: ammonium
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  atmospheric_data:
    name: atmospheric_data
    annotations:
      Expected_value:
        tag: Expected_value
        value: atmospheric data name;measurement value
    description: Measurement of atmospheric data; can include multiple data
    title: atmospheric data
    examples:
    - value: wind speed;9 knots
    from_schema: https://w3id.org/mixs
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0001097
    alias: atmospheric_data
    owner: Water
    domain_of:
    - Water
    range: string
    multivalued: true
  bacteria_carb_prod:
    name: bacteria_carb_prod
    description: Measurement of bacterial carbon production
    title: bacterial carbon production
    examples:
    - value: 2.53 microgram per liter per hour
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - production
    slot_uri: MIXS:0000173
    alias: bacteria_carb_prod
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  bac_prod:
    name: bac_prod
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per cubic meter per day
    description: Bacterial production in the water column measured by isotope uptake
    title: bacterial production
    examples:
    - value: 5 milligram per cubic meter per day
    from_schema: https://w3id.org/mixs
    keywords:
    - production
    slot_uri: MIXS:0000683
    alias: bac_prod
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  bac_resp:
    name: bac_resp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per cubic meter per day, micromole oxygen per liter per hour
    description: Measurement of bacterial respiration in the water column
    title: bacterial respiration
    examples:
    - value: 300 micromole oxygen per liter per hour
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000684
    alias: bac_resp
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  biomass:
    name: biomass
    annotations:
      Expected_value:
        tag: Expected_value
        value: biomass type;measurement value
      Preferred_unit:
        tag: Preferred_unit
        value: ton, kilogram, gram
    description: Amount of biomass; should include the name for the part of biomass
      measured, e.g. Microbial, total. Can include multiple measurements
    title: biomass
    examples:
    - value: total;20 gram
    from_schema: https://w3id.org/mixs
    keywords:
    - biomass
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000174
    alias: biomass
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    multivalued: true
  bishomohopanol:
    name: bishomohopanol
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, microgram per gram
    description: Concentration of bishomohopanol
    title: bishomohopanol
    examples:
    - value: 14 microgram per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000175
    alias: bishomohopanol
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  bromide:
    name: bromide
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: parts per million
    description: Concentration of bromide
    title: bromide
    examples:
    - value: 0.05 parts per million
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000176
    alias: bromide
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  calcium:
    name: calcium
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per liter, micromole per liter, parts per million
    description: Concentration of calcium in the sample
    title: calcium
    examples:
    - value: 0.2 micromole per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000432
    alias: calcium
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  carb_nitro_ratio:
    name: carb_nitro_ratio
    annotations:
      Expected_value:
        tag: Expected_value
        value: measurement value
    description: Ratio of amount or concentrations of carbon to nitrogen
    title: carbon/nitrogen ratio
    examples:
    - value: '0.417361111'
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - nitrogen
    - ratio
    string_serialization: '{float}:{float}'
    slot_uri: MIXS:0000310
    alias: carb_nitro_ratio
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: float
  chem_administration:
    name: chem_administration
    annotations:
      Expected_value:
        tag: Expected_value
        value: CHEBI;timestamp
    description: List of chemical compounds administered to the host or site where
      sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can
      include multiple compounds. For chemical entities of biological interest ontology
      (chebi) (v 163), http://purl.bioontology.org/ontology/chebi
    title: chemical administration
    examples:
    - value: agar [CHEBI:2509];2018-05-11T20:00Z
    from_schema: https://w3id.org/mixs
    keywords:
    - administration
    string_serialization: '{termLabel} [{termID}];{timestamp}'
    slot_uri: MIXS:0000751
    alias: chem_administration
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodFarmEnvironment
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    multivalued: true
  chloride:
    name: chloride
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per liter, parts per million
    description: Concentration of chloride in the sample
    title: chloride
    examples:
    - value: 5000 milligram per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000429
    alias: chloride
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  chlorophyll:
    name: chlorophyll
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per cubic meter, microgram per liter
    description: Concentration of chlorophyll
    title: chlorophyll
    examples:
    - value: 5 milligram per cubic meter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000177
    alias: chlorophyll
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  conduc:
    name: conduc
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milliSiemens per centimeter
    description: Electrical conductivity of water
    title: conductivity
    examples:
    - value: 10 milliSiemens per centimeter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000692
    alias: conduc
    owner: Water
    domain_of:
    - FoodFarmEnvironment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  density:
    name: density
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: gram per cubic meter, gram per cubic centimeter
    description: Density of the sample, which is its mass per unit volume (aka volumetric
      mass density)
    title: density
    examples:
    - value: 1000 kilogram per cubic meter
    from_schema: https://w3id.org/mixs
    keywords:
    - density
    slot_uri: MIXS:0000435
    alias: density
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diether_lipids:
    name: diether_lipids
    annotations:
      Expected_value:
        tag: Expected_value
        value: diether lipid name;measurement value
      Preferred_unit:
        tag: Preferred_unit
        value: nanogram per liter
    description: Concentration of diether lipids; can include multiple types of diether
      lipids
    title: diether lipids
    examples:
    - value: 0.2 nanogram per liter
    from_schema: https://w3id.org/mixs
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000178
    alias: diether_lipids
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    multivalued: true
  diss_carb_dioxide:
    name: diss_carb_dioxide
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter
    description: Concentration of dissolved carbon dioxide in the sample or liquid
      portion of the sample
    title: dissolved carbon dioxide
    examples:
    - value: 5 milligram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - dissolved
    slot_uri: MIXS:0000436
    alias: diss_carb_dioxide
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_hydrogen:
    name: diss_hydrogen
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter
    description: Concentration of dissolved hydrogen
    title: dissolved hydrogen
    examples:
    - value: 0.3 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    slot_uri: MIXS:0000179
    alias: diss_hydrogen
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_inorg_carb:
    name: diss_inorg_carb
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, milligram per liter, parts per million
    description: Dissolved inorganic carbon concentration in the sample, typically
      measured after filtering the sample using a 0.45 micrometer filter
    title: dissolved inorganic carbon
    examples:
    - value: 2059 micromole per kilogram
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - dissolved
    - inorganic
    slot_uri: MIXS:0000434
    alias: diss_inorg_carb
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_inorg_nitro:
    name: diss_inorg_nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, micromole per liter
    description: Concentration of dissolved inorganic nitrogen
    title: dissolved inorganic nitrogen
    examples:
    - value: 761 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    - inorganic
    - nitrogen
    slot_uri: MIXS:0000698
    alias: diss_inorg_nitro
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_inorg_phosp:
    name: diss_inorg_phosp
    description: Concentration of dissolved inorganic phosphorus in the sample
    title: dissolved inorganic phosphorus
    examples:
    - value: 56.5 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    - inorganic
    - phosphorus
    slot_uri: MIXS:0000106
    alias: diss_inorg_phosp
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_org_carb:
    name: diss_org_carb
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter
    description: Concentration of dissolved organic carbon in the sample, liquid portion
      of the sample, or aqueous phase of the fluid
    title: dissolved organic carbon
    examples:
    - value: 197 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - dissolved
    - organic
    slot_uri: MIXS:0000433
    alias: diss_org_carb
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_org_nitro:
    name: diss_org_nitro
    description: Dissolved organic nitrogen concentration measured as; total dissolved
      nitrogen - NH4 - NO3 - NO2
    title: dissolved organic nitrogen
    examples:
    - value: 0.05 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    - nitrogen
    - organic
    slot_uri: MIXS:0000162
    alias: diss_org_nitro
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  diss_oxygen:
    name: diss_oxygen
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per kilogram, milligram per liter
    description: Concentration of dissolved oxygen
    title: dissolved oxygen
    examples:
    - value: 175 micromole per kilogram
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    - oxygen
    slot_uri: MIXS:0000119
    alias: diss_oxygen
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  down_par:
    name: down_par
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microEinstein per square meter per second, microEinstein per square
          centimeter per second
    description: Visible waveband radiance and irradiance measurements in the water
      column
    title: downward PAR
    examples:
    - value: 28.71 microEinstein per square meter per second
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000703
    alias: down_par
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  fluor:
    name: fluor
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram chlorophyll a per cubic meter, volts
    description: Raw or converted fluorescence of water
    title: fluorescence
    examples:
    - value: 2.5 volts
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000704
    alias: fluor
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  glucosidase_act:
    name: glucosidase_act
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: mol per liter per hour
    description: Measurement of glucosidase activity
    title: glucosidase activity
    examples:
    - value: 5 mol per liter per hour
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000137
    alias: glucosidase_act
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  light_intensity:
    name: light_intensity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: lux
    description: Measurement of light intensity
    title: light intensity
    examples:
    - value: 0.3 lux
    from_schema: https://w3id.org/mixs
    keywords:
    - intensity
    - light
    slot_uri: MIXS:0000706
    alias: light_intensity
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  magnesium:
    name: magnesium
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: mole per liter, milligram per liter, parts per million, micromole per
          kilogram
    description: Concentration of magnesium in the sample
    title: magnesium
    examples:
    - value: 52.8 micromole per kilogram
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000431
    alias: magnesium
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  mean_frict_vel:
    name: mean_frict_vel
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter per second
    description: Measurement of mean friction velocity
    title: mean friction velocity
    examples:
    - value: 0.5 meter per second
    from_schema: https://w3id.org/mixs
    keywords:
    - mean
    - velocity
    slot_uri: MIXS:0000498
    alias: mean_frict_vel
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  mean_peak_frict_vel:
    name: mean_peak_frict_vel
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter per second
    description: Measurement of mean peak friction velocity
    title: mean peak friction velocity
    examples:
    - value: 1 meter per second
    from_schema: https://w3id.org/mixs
    keywords:
    - mean
    - peak
    - velocity
    slot_uri: MIXS:0000502
    alias: mean_peak_frict_vel
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  misc_param:
    name: misc_param
    annotations:
      Expected_value:
        tag: Expected_value
        value: parameter name;measurement value
    description: Any other measurement performed or parameter collected, that is not
      listed here
    title: miscellaneous parameter
    examples:
    - value: Bicarbonate ion concentration;2075 micromole per kilogram
    from_schema: https://w3id.org/mixs
    keywords:
    - parameter
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000752
    alias: misc_param
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    multivalued: true
  n_alkanes:
    name: n_alkanes
    annotations:
      Expected_value:
        tag: Expected_value
        value: n-alkane name;measurement value
    description: Concentration of n-alkanes; can include multiple n-alkanes
    title: n-alkanes
    examples:
    - value: n-hexadecane;100 milligram per liter
    from_schema: https://w3id.org/mixs
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000503
    alias: n_alkanes
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    multivalued: true
  nitrate:
    name: nitrate
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of nitrate in the sample
    title: nitrate
    examples:
    - value: 65 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - nitrate
    slot_uri: MIXS:0000425
    alias: nitrate
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  nitrite:
    name: nitrite
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of nitrite in the sample
    title: nitrite
    examples:
    - value: 0.5 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - nitrite
    slot_uri: MIXS:0000426
    alias: nitrite
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  nitro:
    name: nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter
    description: Concentration of nitrogen (total)
    title: nitrogen
    examples:
    - value: 4.2 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - nitrogen
    slot_uri: MIXS:0000504
    alias: nitro
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  org_carb:
    name: org_carb
    description: Concentration of organic carbon
    title: organic carbon
    examples:
    - value: 1.5 microgram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - organic
    slot_uri: MIXS:0000508
    alias: org_carb
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  org_matter:
    name: org_matter
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter
    description: Concentration of organic matter
    title: organic matter
    examples:
    - value: 1.75 milligram per cubic meter
    from_schema: https://w3id.org/mixs
    keywords:
    - organic
    slot_uri: MIXS:0000204
    alias: org_matter
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Soil
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  org_nitro:
    name: org_nitro
    description: Concentration of organic nitrogen
    title: organic nitrogen
    examples:
    - value: 4 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - nitrogen
    - organic
    slot_uri: MIXS:0000205
    alias: org_nitro
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Soil
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  organism_count:
    name: organism_count
    annotations:
      Expected_value:
        tag: Expected_value
        value: organism name;measurement value;enumeration
    description: 'Total cell count of any organism (or group of organisms) per gram,
      volume or area of sample, should include name of organism followed by count.
      The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should
      also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)'
    title: organism count
    examples:
    - value: total prokaryotes;3.5e7 cells per milliliter;qPCR
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - organism
    string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|other]'
    slot_uri: MIXS:0000103
    alias: organism_count
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    multivalued: true
  oxy_stat_samp:
    name: oxy_stat_samp
    description: Oxygenation status of sample
    title: oxygenation status of sample
    examples:
    - value: aerobic
    from_schema: https://w3id.org/mixs
    keywords:
    - oxygen
    - sample
    - status
    slot_uri: MIXS:0000753
    alias: oxy_stat_samp
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: OxyStatSampEnum
  ph:
    name: ph
    description: Ph measurement of the sample, or liquid portion of sample, or aqueous
      phase of the fluid
    title: pH
    examples:
    - value: '7.2'
    from_schema: https://w3id.org/mixs
    keywords:
    - ph
    slot_uri: MIXS:0001001
    alias: ph
    owner: Water
    domain_of:
    - FoodFarmEnvironment
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Soil
    - WastewaterSludge
    - Water
    range: float
  part_org_carb:
    name: part_org_carb
    description: Concentration of particulate organic carbon
    title: particulate organic carbon
    examples:
    - value: 1.92 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - organic
    - particle
    - particulate
    slot_uri: MIXS:0000515
    alias: part_org_carb
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  part_org_nitro:
    name: part_org_nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, micromole per liter
    description: Concentration of particulate organic nitrogen
    title: particulate organic nitrogen
    examples:
    - value: 0.3 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - nitrogen
    - organic
    - particle
    - particulate
    slot_uri: MIXS:0000719
    alias: part_org_nitro
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  perturbation:
    name: perturbation
    annotations:
      Expected_value:
        tag: Expected_value
        value: perturbation type name;perturbation interval and duration
    description: Type of perturbation, e.g. chemical administration, physical disturbance,
      etc., coupled with perturbation regimen including how many times the perturbation
      was repeated, how long each perturbation lasted, and the start and end time
      of the entire perturbation period; can include multiple perturbation types
    title: perturbation
    examples:
    - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M
    from_schema: https://w3id.org/mixs
    keywords:
    - perturbation
    string_serialization: '{text};{Rn/start_time/end_time/duration}'
    slot_uri: MIXS:0000754
    alias: perturbation
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    multivalued: true
  petroleum_hydrocarb:
    name: petroleum_hydrocarb
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter
    description: Concentration of petroleum hydrocarbon
    title: petroleum hydrocarbon
    examples:
    - value: 0.05 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - hydrocarbon
    - petroleum
    slot_uri: MIXS:0000516
    alias: petroleum_hydrocarb
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  phaeopigments:
    name: phaeopigments
    annotations:
      Expected_value:
        tag: Expected_value
        value: phaeopigment name;measurement value
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per cubic meter
    description: Concentration of phaeopigments; can include multiple phaeopigments
    title: phaeopigments
    examples:
    - value: 2.5 milligram per cubic meter
    from_schema: https://w3id.org/mixs
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000180
    alias: phaeopigments
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    multivalued: true
  phosphate:
    name: phosphate
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter
    description: Concentration of phosphate
    title: phosphate
    examples:
    - value: 0.7 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - phosphate
    slot_uri: MIXS:0000505
    alias: phosphate
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  phosplipid_fatt_acid:
    name: phosplipid_fatt_acid
    annotations:
      Expected_value:
        tag: Expected_value
        value: phospholipid fatty acid name;measurement value
    description: Concentration of phospholipid fatty acids; can include multiple values
    title: phospholipid fatty acid
    examples:
    - value: 2.98 milligram per liter
    from_schema: https://w3id.org/mixs
    string_serialization: '{text};{float} {unit}'
    slot_uri: MIXS:0000181
    alias: phosplipid_fatt_acid
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    multivalued: true
  photon_flux:
    name: photon_flux
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: number of photons per second per unit area
    description: Measurement of photon flux
    title: photon flux
    examples:
    - value: 3.926 micromole photons per second per square meter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000725
    alias: photon_flux
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  potassium:
    name: potassium
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per liter, parts per million
    description: Concentration of potassium in the sample
    title: potassium
    examples:
    - value: 463 milligram per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000430
    alias: potassium
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  pressure:
    name: pressure
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: atmosphere
    description: Pressure to which the sample is subject to, in atmospheres
    title: pressure
    examples:
    - value: 50 atmosphere
    from_schema: https://w3id.org/mixs
    keywords:
    - pressure
    slot_uri: MIXS:0000412
    alias: pressure
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  primary_prod:
    name: primary_prod
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per cubic meter per day, gram per square meter per day
    description: Measurement of primary production, generally measured as isotope
      uptake
    title: primary production
    examples:
    - value: 100 milligram per cubic meter per day
    from_schema: https://w3id.org/mixs
    keywords:
    - primary
    - production
    slot_uri: MIXS:0000728
    alias: primary_prod
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  redox_potential:
    name: redox_potential
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: millivolt
    description: Redox potential, measured relative to a hydrogen cell, indicating
      oxidation or reduction potential
    title: redox potential
    examples:
    - value: 300 millivolt
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000182
    alias: redox_potential
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  salinity:
    name: salinity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: practical salinity unit, percentage
    description: The total concentration of all dissolved salts in a liquid or solid
      sample. While salinity can be measured by a complete chemical analysis, this
      method is difficult and time consuming. More often, it is instead derived from
      the conductivity measurement. This is known as practical salinity. These derivations
      compare the specific conductance of the sample to a salinity standard such as
      seawater
    title: salinity
    examples:
    - value: 25 practical salinity unit
    from_schema: https://w3id.org/mixs
    keywords:
    - salinity
    slot_uri: MIXS:0000183
    alias: salinity
    owner: Water
    domain_of:
    - Air
    - FoodFarmEnvironment
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  samp_store_dur:
    name: samp_store_dur
    description: Duration for which the sample was stored. Indicate the duration for
      which the sample was stored written in ISO 8601 format
    title: sample storage duration
    examples:
    - value: P1Y6M
    from_schema: https://w3id.org/mixs
    keywords:
    - duration
    - period
    - sample
    - storage
    slot_uri: MIXS:0000116
    alias: samp_store_dur
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
    structured_pattern:
      syntax: ^{duration}$
      interpolated: true
      partial_match: true
  samp_store_loc:
    name: samp_store_loc
    annotations:
      Expected_value:
        tag: Expected_value
        value: location name
    description: Location at which sample was stored, usually name of a specific freezer/room
    title: sample storage location
    examples:
    - value: Freezer no:5
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - sample
    - storage
    slot_uri: MIXS:0000755
    alias: samp_store_loc
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
  samp_store_temp:
    name: samp_store_temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: Temperature at which sample was stored, e.g. -80 degree Celsius
    title: sample storage temperature
    examples:
    - value: -80 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - sample
    - storage
    - temperature
    slot_uri: MIXS:0000110
    alias: samp_store_temp
    owner: Water
    domain_of:
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  samp_vol_we_dna_ext:
    name: samp_vol_we_dna_ext
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milliliter, gram, milligram, square centimeter
    description: 'Volume (ml) or mass (g) of total collected sample processed for
      DNA extraction. Note: total sample collected should be entered under the term
      Sample Size (MIXS:0000001)'
    title: sample volume or weight for DNA extraction
    examples:
    - value: 1500 milliliter
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - dna
    - sample
    - volume
    - weight
    slot_uri: MIXS:0000111
    alias: samp_vol_we_dna_ext
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  silicate:
    name: silicate
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter
    description: Concentration of silicate
    title: silicate
    examples:
    - value: 0.05 micromole per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000184
    alias: silicate
    owner: Water
    domain_of:
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  size_frac_low:
    name: size_frac_low
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micrometer
    description: Refers to the mesh/pore size used to pre-filter/pre-sort the sample.
      Materials smaller than the size threshold are excluded from the sample
    title: size-fraction lower threshold
    examples:
    - value: 0.2 micrometer
    from_schema: https://w3id.org/mixs
    keywords:
    - lower
    slot_uri: MIXS:0000735
    alias: size_frac_low
    owner: Water
    domain_of:
    - Agriculture
    - FoodFarmEnvironment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  size_frac_up:
    name: size_frac_up
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micrometer
    description: Mesh or pore size of the device used to retain the sample. Materials
      larger than the size threshold are excluded from the sample.
    title: size-fraction upper threshold
    examples:
    - value: 20 micrometer
    from_schema: https://w3id.org/mixs
    keywords:
    - upper
    slot_uri: MIXS:0000736
    alias: size_frac_up
    owner: Water
    domain_of:
    - Agriculture
    - FoodFarmEnvironment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  sodium:
    name: sodium
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per liter, parts per million
    description: Sodium concentration in the sample
    title: sodium
    examples:
    - value: 10.5 milligram per liter
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000428
    alias: sodium
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  soluble_react_phosp:
    name: soluble_react_phosp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of soluble reactive phosphorus
    title: soluble reactive phosphorus
    examples:
    - value: 0.1 milligram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - phosphorus
    - soluble
    slot_uri: MIXS:0000738
    alias: soluble_react_phosp
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  sulfate:
    name: sulfate
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of sulfate in the sample
    title: sulfate
    examples:
    - value: 5 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - sulfate
    slot_uri: MIXS:0000423
    alias: sulfate
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  sulfide:
    name: sulfide
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: Concentration of sulfide in the sample
    title: sulfide
    examples:
    - value: 2 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - sulfide
    slot_uri: MIXS:0000424
    alias: sulfide
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  suspend_part_matter:
    name: suspend_part_matter
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milligram per liter
    description: Concentration of suspended particulate matter
    title: suspended particulate matter
    examples:
    - value: 0.5 milligram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - particle
    - particulate
    - suspended
    slot_uri: MIXS:0000741
    alias: suspend_part_matter
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  temp:
    name: temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: Temperature of the sample at the time of sampling
    title: temperature
    examples:
    - value: 25 degree Celsius
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - temperature
    slot_uri: MIXS:0000113
    alias: temp
    owner: Water
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tidal_stage:
    name: tidal_stage
    description: Stage of tide
    title: tidal stage
    examples:
    - value: high tide
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000750
    alias: tidal_stage
    owner: Water
    domain_of:
    - Sediment
    - Water
    range: TidalStageEnum
  tot_depth_water_col:
    name: tot_depth_water_col
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: Measurement of total depth of water column
    title: total depth of water column
    examples:
    - value: 500 meter
    from_schema: https://w3id.org/mixs
    keywords:
    - depth
    - total
    - water
    slot_uri: MIXS:0000634
    alias: tot_depth_water_col
    owner: Water
    domain_of:
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tot_diss_nitro:
    name: tot_diss_nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter
    description: 'Total dissolved nitrogen concentration, reported as nitrogen, measured
      by: total dissolved nitrogen = NH4 + NO3NO2 + dissolved organic nitrogen'
    title: total dissolved nitrogen
    examples:
    - value: 40 microgram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - dissolved
    - nitrogen
    - total
    slot_uri: MIXS:0000744
    alias: tot_diss_nitro
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tot_inorg_nitro:
    name: tot_inorg_nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter
    description: Total inorganic nitrogen content
    title: total inorganic nitrogen
    examples:
    - value: 40 microgram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - inorganic
    - nitrogen
    - total
    slot_uri: MIXS:0000745
    alias: tot_inorg_nitro
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tot_nitro:
    name: tot_nitro
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, micromole per liter, milligram per liter
    description: 'Total nitrogen concentration of water samples, calculated by: total
      nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured
      without filtering, reported as nitrogen'
    title: total nitrogen concentration
    examples:
    - value: 50 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - concentration
    - nitrogen
    - total
    slot_uri: MIXS:0000102
    alias: tot_nitro
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tot_part_carb:
    name: tot_part_carb
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: microgram per liter, micromole per liter
    description: Total particulate carbon content
    title: total particulate carbon
    examples:
    - value: 35 micromole per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    - particle
    - particulate
    - total
    slot_uri: MIXS:0000747
    alias: tot_part_carb
    owner: Water
    domain_of:
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  tot_phosp:
    name: tot_phosp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, milligram per liter, parts per million
    description: 'Total phosphorus concentration in the sample, calculated by: total
      phosphorus = total dissolved phosphorus + particulate phosphorus'
    title: total phosphorus
    examples:
    - value: 0.03 milligram per liter
    from_schema: https://w3id.org/mixs
    keywords:
    - phosphorus
    - total
    slot_uri: MIXS:0000117
    alias: tot_phosp
    owner: Water
    domain_of:
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  turbidity:
    name: turbidity
    description: Measure of the amount of cloudiness or haziness in water caused by
      individual particles
    title: turbidity
    examples:
    - value: 0.3 nephelometric turbidity units
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000191
    alias: turbidity
    owner: Water
    domain_of:
    - FoodFarmEnvironment
    - MicrobialMatBiofilm
    - Sediment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  water_current:
    name: water_current
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: cubic meter per second, knots
    description: Measurement of magnitude and direction of flow within a fluid
    title: water current
    examples:
    - value: 10 cubic meter per second
    from_schema: https://w3id.org/mixs
    keywords:
    - water
    slot_uri: MIXS:0000203
    alias: water_current
    owner: Water
    domain_of:
    - MiscellaneousNaturalOrArtificialEnvironment
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
class_uri: MIXS:0016014