Combination: Miuvig combined with BuiltEnvironment (MiuvigBuiltEnvironment)

MIxS Data that comply with the Miuvig checklist and the BuiltEnvironment Extension

Composition

Miuvig [Checklist] + BuiltEnvironment [Extension]

Terms

MIXS ID	Name	Cardinality and Range	Description
MIXS:0001107	samp_name	1 String	A local identifier or name that for the material sample used for extracting n...
MIXS:0000017	size_frac	0..1 recommended String	Filtering pore size used in sample preparation
MIXS:0000043	lib_screen	0..1 recommended String	Specific enrichment or screening methods applied before and/or after creating...
MIXS:0000035	source_uvig	1 String	Type of dataset from which the UViG was obtained
MIXS:0000062	ref_db	0..1 recommended String	List of database(s) used for ORF annotation, along with version number and re...
MIXS:0000038	nucl_acid_amp	0..1 recommended String	A link to a literature reference, electronic resource or a standard operating...
MIXS:0000039	lib_size	0..1 recommended Integer	Total number of clones in the library prepared for the project
MIXS:0000047	mid	0..1 recommended String	Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to spe...
MIXS:0000057	assembly_name	0..1 recommended String	Name/version of the assembly provided by the submitter that is used in the ge...
MIXS:0000113	temp	0..1 recommended String	Temperature of the sample at the time of sampling
MIXS:0000069	compl_score	0..1 recommended String	Completeness score is typically based on either the fraction of markers found...
MIXS:0000067	trnas	0..1 String	The total number of tRNAs identified from the SAG or MAG
MIXS:0000037	nucl_acid_ext	0..1 recommended String	A link to a literature reference, electronic resource or a standard operating...
MIXS:0000001	samp_size	0..1 recommended String	The total amount or size (volume (ml), mass (g) or area (m2) ) of sample coll...
MIXS:0000094	alt	0..1 recommended String	Heights of objects such as airplanes, space shuttles, rockets, atmospheric ba...
MIXS:0000024	estimated_size	0..1 String	The estimated size of the genome prior to sequencing
MIXS:0000026	source_mat_id	* recommended String	A unique identifier assigned to a material sample (as defined by http://rs
MIXS:0000111	samp_vol_we_dna_ext	0..1 String	Volume (ml) or mass (g) of total collected sample processed for DNA extractio...
MIXS:0000027	pathogenicity	0..1 String	To what is the entity pathogenic
MIXS:0000040	lib_reads_seqd	0..1 recommended Integer	Total number of clones sequenced from the library
MIXS:0000002	samp_collect_device	0..1 recommended String	The device used to collect an environmental sample
MIXS:0000060	number_contig	1 Integer	Total number of contigs in the cleaned/submitted assembly that makes up a giv...
MIXS:0000028	biotic_relationship	0..1 BioticRelationshipEnum	Description of relationship(s) between the subject organism and other organis...
MIXS:0000068	trna_ext_software	0..1 String	Tools used for tRNA identification
MIXS:0000041	lib_layout	0..1 recommended LibLayoutEnum	Specify whether to expect single, paired, or other configuration of reads
MIXS:0000056	assembly_qual	1 AssemblyQualEnum	The assembly quality category is based on sets of criteria outlined for each ...
MIXS:0000025	ref_biomaterial	0..1 String	Primary publication if isolated before genome publication; otherwise, primary...
MIXS:0000092	project_name	1 String	Name of the project within which the sequencing was organized
MIXS:0000042	lib_vector	0..1 recommended String	Cloning vector type(s) used in construction of libraries
MIXS:0000030	host_spec_range	* String	The range and diversity of host species that an organism is capable of infect...
MIXS:0001321	neg_cont_type	0..1 recommended NegContTypeEnum	The substance or equipment used as a negative control in an investigation
MIXS:0000036	virus_enrich_appr	1 VirusEnrichApprEnum	List of approaches used to enrich the sample for viruses, if any
MIXS:0000048	adapters	0..1 recommended String	Adapters provide priming sequences for both amplification and sequencing of t...
MIXS:0000058	assembly_software	1 String	Tool(s) used for assembly, including version number and parameters
MIXS:0000053	tax_ident	0..1 TaxIdentEnum	The phylogenetic marker(s) used to assign an organism name to the SAG or MAG
MIXS:0000059	annot	0..1 String	Tool used for annotation, or for cases where annotation was provided by a com...
MIXS:0001322	pos_cont_type	0..1 recommended String	The substance, mixture, product, or apparatus used to verify that a process w...
MIXS:0000061	feat_pred	0..1 recommended String	Method used to predict UViGs features such as ORFs, integration site, etc
MIXS:0000070	compl_software	0..1 String	Tools used for completion estimate, i
MIXS:0000013	env_local_scale	1 String	Report the entity or entities which are in the sample or specimen s local vic...
MIXS:0000016	samp_mat_process	0..1 recommended String	A brief description of any processing applied to the sample during or after r...
MIXS:0000063	sim_search_meth	0..1 recommended String	Tool used to compare ORFs with database, along with version and cutoffs used
MIXS:0000031	host_disease_stat	0..1 recommended String	List of diseases with which the host has been diagnosed; can include multiple...
MIXS:0000018	depth	0..1 recommended String	The vertical distance below local surface
MIXS:0001225	samp_collect_method	0..1 recommended String	The method employed for collecting the sample
MIXS:0000071	compl_appr	0..1 recommended ComplApprEnum	The approach used to determine the completeness of a given genomic assembly, ...
MIXS:0000029	specific_host	0..1 String	Report the host's taxonomic name and/or NCBI taxonomy ID
MIXS:0000014	env_medium	1 String	Report the environmental material(s) immediately surrounding the sample or sp...
MIXS:0001320	samp_taxon_id	1 String	NCBI taxon id of the sample
MIXS:0000010	geo_loc_name	1 String	The geographical origin of the sample as defined by the country or sea name f...
MIXS:0000011	collection_date	1 Datetime	The time of sampling, either as an instance (single point in time) or interva...
MIXS:0000050	seq_meth	1 String	Sequencing machine used
MIXS:0000009	lat_lon	1 String	The geographical origin of the sample as defined by latitude and longitude
MIXS:0000093	elev	0..1 recommended String	Elevation of the sampling site is its height above a fixed reference point, m...
MIXS:0000012	env_broad_scale	1 String	Report the major environmental system the sample or specimen came from
MIXS:0000064	tax_class	0..1 recommended String	Method used for taxonomic classification, along with reference database used,...
MIXS:0000008	experimental_factor	* recommended String	Variable aspects of an experiment design that can be used to describe an expe...
MIXS:0000075	sort_tech	0..1 recommended SortTechEnum	Method used to sort/isolate cells or particles of interest
MIXS:0000076	sc_lysis_approach	0..1 recommended ScLysisApproachEnum	Method used to free DNA from interior of the cell(s) or particle(s)
MIXS:0000054	sc_lysis_method	0..1 recommended String	Name of the kit or standard protocol used for cell(s) or particle(s) lysis
MIXS:0000055	wga_amp_appr	0..1 recommended WgaAmpApprEnum	Method used to amplify genomic DNA in preparation for sequencing
MIXS:0000006	wga_amp_kit	0..1 recommended String	Kit used to amplify genomic DNA in preparation for sequencing
MIXS:0000077	bin_param	0..1 recommended BinParamEnum	The parameters that have been applied during the extraction of genomes from m...
MIXS:0000078	bin_software	0..1 recommended String	Tool(s) used for the extraction of genomes from metagenomic datasets, where p...
MIXS:0000079	reassembly_bin	0..1 recommended Boolean	Has an assembly been performed on a genome bin extracted from a metagenomic a...
MIXS:0000080	mag_cov_software	0..1 MagCovSoftwareEnum	Tool(s) used to determine the genome coverage if coverage is used as a binnin...
MIXS:0000081	vir_ident_software	1 String	Tool(s) used for the identification of UViG as a viral genome, software or pr...
MIXS:0000082	pred_genome_type	1 String	Type of genome predicted for the UViG
MIXS:0000083	pred_genome_struc	1 PredGenomeStrucEnum	Expected structure of the viral genome
MIXS:0000084	detec_type	1 String	Type of UViG detection
MIXS:0000085	otu_class_appr	0..1 recommended String	Cutoffs and approach used when clustering species-level OTUs
MIXS:0000086	otu_seq_comp_appr	0..1 recommended String	Tool and thresholds used to compare sequences when computing "species-level" ...
MIXS:0000087	otu_db	0..1 recommended String	Reference database (i
MIXS:0000088	host_pred_appr	0..1 recommended HostPredApprEnum	Tool or approach used for host prediction
MIXS:0000089	host_pred_est_acc	0..1 recommended String	For each tool or approach used for host prediction, estimated false discovery...
MIXS:0000091	associated_resource	* recommended String	A related resource that is referenced, cited, or otherwise associated to the ...
MIXS:0000090	sop	* recommended String	Standard operating procedures used in assembly and/or annotation of genomes, ...
MIXS:0000758	surf_material	1 recommended SurfMaterialEnum	Surface materials at the point of sampling
MIXS:0000759	surf_air_cont	* recommended SurfAirContEnum	Contaminant identified on surface
MIXS:0000121	rel_air_humidity	1 Float	Partial vapor and air pressure, density of the vapor and air, or by the actua...
MIXS:0000122	abs_air_humidity	1 String	Actual mass of water vapor - mh20 - present in the air water vapor mixture
MIXS:0000123	surf_humidity	0..1 recommended Float	Surfaces: water activity as a function of air and material moisture
MIXS:0000124	air_temp	1 String	Temperature of the air at the time of sampling
MIXS:0000125	surf_temp	0..1 recommended String	Temperature of the surface at the time of sampling
MIXS:0000760	surf_moisture_ph	0..1 recommended Float	ph measurement of surface
MIXS:0000761	build_occup_type	1..* BuildOccupTypeEnum	The primary function for which a building or discrete part of a building is i...
MIXS:0000128	surf_moisture	0..1 recommended String	Water held on a surface
MIXS:0000129	dew_point	0..1 String	The temperature to which a given parcel of humid air must be cooled, at const...
MIXS:0000097	carb_dioxide	1 String	Carbon dioxide (gas) amount or concentration at the time of sampling
MIXS:0000756	ventilation_type	1..* String	Ventilation system used in the sampled premises
MIXS:0000103	organism_count	1..* String	Total cell count of any organism (or group of organisms) per gram, volume or ...
MIXS:0000763	indoor_space	1 IndoorSpaceEnum	A distinguishable space within a structure, the purpose for which discrete ar...
MIXS:0000764	indoor_surf	1 recommended IndoorSurfEnum	Type of indoor surface
MIXS:0000765	filter_type	1..* FilterTypeEnum	A device which removes solid particulates or airborne molecular contaminants
MIXS:0000766	heat_cool_type	1..* HeatCoolTypeEnum	Methods of conditioning or heating a room or building
MIXS:0000767	substructure_type	* SubstructureTypeEnum	The substructure or under building is that largely hidden section of the buil...
MIXS:0000768	building_setting	1 BuildingSettingEnum	A location (geography) where a building is set
MIXS:0000769	light_type	1..* LightTypeEnum	Application of light to achieve some practical or aesthetic effect
MIXS:0000216	samp_sort_meth	* String	Method by which samples are sorted; open face filter collecting total suspend...
MIXS:0000770	space_typ_state	1 SpaceTypStateEnum	Customary or normal state of the space
MIXS:0000771	typ_occup_density	1 Float	Customary or normal density of occupants
MIXS:0000772	occup_samp	1 Float	Number of occupants present at time of sample within the given space
MIXS:0000217	occup_density_samp	1 Float	Average number of occupants at time of sampling per square footage
MIXS:0000218	address	0..1 String	The street name and building number where the sampling occurred
MIXS:0000219	adj_room	0..1 String	List of rooms (room number, room name) immediately adjacent to the sampling r...
MIXS:0000773	aero_struc	0..1 AeroStrucEnum	Aerospace structures typically consist of thin plates with stiffeners for the...
MIXS:0000140	amount_light	0..1 String	The unit of illuminance and luminous emittance, measuring luminous flux per u...
MIXS:0000774	arch_struc	0..1 ArchStrucEnum	An architectural structure is a human-made, free-standing, immobile outdoor c...
MIXS:0000775	avg_occup	0..1 Float	Daily average occupancy of room
MIXS:0000141	avg_dew_point	0..1 String	The average of dew point measures taken at the beginning of every hour over a...
MIXS:0000142	avg_temp	0..1 String	The average of temperatures taken at the beginning of every hour over a 24 ho...
MIXS:0000776	bathroom_count	0..1 Integer	The number of bathrooms in the building
MIXS:0000777	bedroom_count	0..1 Integer	The number of bedrooms in the building
MIXS:0000145	built_struc_age	0..1 String	The age of the built structure since construction
MIXS:0000778	built_struc_set	0..1 BuiltStrucSetEnum	The characterization of the location of the built structure as high or low hu...
MIXS:0000721	built_struc_type	0..1 String	A physical structure that is a body or assemblage of bodies in space to form ...
MIXS:0000148	ceil_area	0..1 String	The area of the ceiling space within the room
MIXS:0000779	ceil_cond	0..1 DamagedEnum	The physical condition of the ceiling at the time of sampling; photos or vide...
MIXS:0000780	ceil_finish_mat	0..1 CeilFinishMatEnum	The type of material used to finish a ceiling
MIXS:0000781	ceil_water_mold	0..1 MoldVisibilityEnum	Signs of the presence of mold or mildew on the ceiling
MIXS:0000782	ceil_struc	0..1 CeilStrucEnum	The construction format of the ceiling
MIXS:0000783	ceil_texture	0..1 CeilingWallTextureEnum	The feel, appearance, or consistency of a ceiling surface
MIXS:0000143	ceil_thermal_mass	0..1 String	The ability of the ceiling to provide inertia against temperature fluctuation...
MIXS:0000784	ceil_type	0..1 CeilTypeEnum	The type of ceiling according to the ceiling's appearance or construction
MIXS:0000785	cool_syst_id	0..1 Integer	The cooling system identifier
MIXS:0000786	date_last_rain	0..1 Datetime	The date of the last time it rained
MIXS:0000787	build_docs	0..1 BuildDocsEnum	The building design, construction and operation documents
MIXS:0000158	door_size	0..1 String	The size of the door
MIXS:0000788	door_cond	0..1 DamagedRupturedEnum	The phsical condition of the door
MIXS:0000789	door_direct	0..1 DoorDirectEnum	The direction the door opens
MIXS:0000790	door_loc	0..1 CompassDirections8Enum	The relative location of the door in the room
MIXS:0000791	door_mat	0..1 DoorMatEnum	The material the door is composed of
MIXS:0000792	door_move	0..1 DoorMoveEnum	The type of movement of the door
MIXS:0000793	door_water_mold	0..1 MoldVisibilityEnum	Signs of the presence of mold or mildew on a door
MIXS:0000794	door_type	0..1 DoorTypeEnum	The type of door material
MIXS:0000795	door_comp_type	0..1 DoorCompTypeEnum	The composite type of the door
MIXS:0000796	door_type_metal	0..1 DoorTypeMetalEnum	The type of metal door
MIXS:0000797	door_type_wood	0..1 String	The type of wood door
MIXS:0000798	drawings	0..1 DrawingsEnum	The buildings architectural drawings; if design is chosen, indicate phase-con...
MIXS:0000799	elevator	0..1 Integer	The number of elevators within the built structure
MIXS:0000800	escalator	0..1 Integer	The number of escalators within the built structure
MIXS:0000144	exp_duct	0..1 String	The amount of exposed ductwork in the room
MIXS:0000220	exp_pipe	0..1 String	The number of exposed pipes in the room
MIXS:0000170	ext_door	0..1 Integer	The number of exterior doors in the built structure
MIXS:0000802	fireplace_type	0..1 FireplaceTypeEnum	A firebox with chimney
MIXS:0000164	floor_age	0..1 String	The time period since installment of the carpet or flooring
MIXS:0000165	floor_area	0..1 String	The area of the floor space within the room
MIXS:0000803	floor_cond	0..1 DamagedEnum	The physical condition of the floor at the time of sampling; photos or video ...
MIXS:0000225	floor_count	0..1 Integer	The number of floors in the building, including basements and mechanical pent...
MIXS:0000804	floor_finish_mat	0..1 String	The floor covering type; the finished surface that is walked on
MIXS:0000805	floor_water_mold	0..1 FloorWaterMoldEnum	Signs of the presence of mold or mildew in a room
MIXS:0000806	floor_struc	0..1 FloorStrucEnum	Refers to the structural elements and subfloor upon which the finish flooring...
MIXS:0000166	floor_thermal_mass	0..1 String	The ability of the floor to provide inertia against temperature fluctuations
MIXS:0000226	freq_clean	0..1 FreqCleanEnum	The number of times the sample location is cleaned
MIXS:0000227	freq_cook	0..1 String	The number of times a meal is cooked per week
MIXS:0000807	furniture	0..1 FurnitureEnum	The types of furniture present in the sampled room
MIXS:0000808	gender_restroom	0..1 GenderRestroomEnum	The gender type of the restroom
MIXS:0000228	hall_count	0..1 Integer	The total count of hallways and cooridors in the built structure
MIXS:0000809	handidness	0..1 HandidnessEnum	The handidness of the individual sampled
MIXS:0000810	heat_deliv_loc	0..1 CompassDirections8Enum	The location of heat delivery within the room
MIXS:0000812	heat_sys_deliv_meth	0..1 HeatSysDelivMethEnum	The method by which the heat is delivered through the system
MIXS:0000833	heat_system_id	0..1 Integer	The heating system identifier
MIXS:0000167	height_carper_fiber	0..1 String	The average carpet fiber height in the indoor environment
MIXS:0000168	inside_lux	0..1 String	The recorded value at sampling time (power density)
MIXS:0000813	int_wall_cond	0..1 DamagedEnum	The physical condition of the wall at the time of sampling; photos or video p...
MIXS:0000814	last_clean	0..1 Datetime	The last time the floor was cleaned (swept, mopped, vacuumed)
MIXS:0000229	max_occup	0..1 String	The maximum amount of people allowed in the indoor environment
MIXS:0000815	mech_struc	0..1 MechStrucEnum	mechanical structure: a moving structure
MIXS:0000230	number_plants	0..1 String	The number of plant(s) in the sampling space
MIXS:0000231	number_pets	0..1 String	The number of pets residing in the sampled space
MIXS:0000232	number_resident	0..1 String	The number of individuals currently occupying in the sampling location
MIXS:0000816	occup_document	0..1 OccupDocumentEnum	The type of documentation of occupancy
MIXS:0000817	ext_wall_orient	0..1 CompassDirections8Enum	The orientation of the exterior wall
MIXS:0000818	ext_window_orient	0..1 CompassDirections8Enum	The compass direction the exterior window of the room is facing
MIXS:0000188	rel_humidity_out	0..1 String	The recorded outside relative humidity value at the time of sampling
MIXS:0000819	pres_animal_insect	0..1 String	The type and number of animals or insects present in the sampling space
MIXS:0000820	quad_pos	0..1 QuadPosEnum	The quadrant position of the sampling room within the building
MIXS:0000821	rel_samp_loc	0..1 RelSampLocEnum	The sampling location within the train car
MIXS:0000169	room_air_exch_rate	0..1 String	The rate at which outside air replaces indoor air in a given space
MIXS:0000233	room_architec_elem	0..1 String	The unique details and component parts that, together, form the architecture ...
MIXS:0000822	room_condt	0..1 RoomCondtEnum	The condition of the room at the time of sampling
MIXS:0000234	room_count	0..1 Integer	The total count of rooms in the built structure including all room types
MIXS:0000192	room_dim	0..1 String	The length, width and height of sampling room
MIXS:0000193	room_door_dist	0..1 String	Distance between doors (meters) in the hallway between the sampling room and ...
MIXS:0000823	room_loc	0..1 RoomLocEnum	The position of the room within the building
MIXS:0000235	room_moist_dam_hist	0..1 Integer	The history of moisture damage or mold in the past 12 months
MIXS:0000194	room_net_area	0..1 String	The net floor area of sampling room
MIXS:0000236	room_occup	0..1 String	Count of room occupancy at time of sampling
MIXS:0000824	room_samp_pos	0..1 RoomSampPosEnum	The horizontal sampling position in the room relative to architectural elemen...
MIXS:0000825	room_type	0..1 String	The main purpose or activity of the sampling room
MIXS:0000195	room_vol	0..1 String	Volume of sampling room
MIXS:0000237	room_window_count	0..1 Integer	Number of windows in the room
MIXS:0000826	room_connected	0..1 RoomConnectedEnum	List of rooms connected to the sampling room by a doorway
MIXS:0000238	room_hallway	0..1 String	List of room(s) (room number, room name) located in the same hallway as sampl...
MIXS:0000242	room_door_share	0..1 String	List of room(s) (room number, room name) sharing a door with the sampling roo...
MIXS:0000243	room_wall_share	0..1 String	List of room(s) (room number, room name) sharing a wall with the sampling roo...
MIXS:0000827	samp_weather	0..1 SampWeatherEnum	The weather on the sampling day
MIXS:0000828	samp_floor	0..1 String	The floor of the building, where the sampling room is located
MIXS:0000244	samp_room_id	0..1 Integer	Sampling room number
MIXS:0000196	samp_time_out	0..1 String	The recent and long term history of outside sampling
MIXS:0000829	season	0..1 String	The season when sampling occurred
MIXS:0000830	season_use	0..1 SeasonUseEnum	The seasons the space is occupied
MIXS:0000831	shading_device_cond	0..1 DamagedRupturedEnum	The physical condition of the shading device at the time of sampling
MIXS:0000832	shading_device_loc	0..1 ShadingDeviceLocEnum	The location of the shading device in relation to the built structure
MIXS:0000245	shading_device_mat	0..1 String	The material the shading device is composed of
MIXS:0000834	shad_dev_water_mold	0..1 MoldVisibilityEnum	Signs of the presence of mold or mildew on the shading device
MIXS:0000835	shading_device_type	0..1 ShadingDeviceTypeEnum	The type of shading device
MIXS:0000214	specific_humidity	0..1 String	The mass of water vapour in a unit mass of moist air, usually expressed as gr...
MIXS:0000836	specific	0..1 SpecificEnum	The building specifications
MIXS:0000197	temp_out	0..1 String	The recorded temperature value at sampling time outside
MIXS:0000837	train_line	0..1 TrainLineEnum	The subway line name
MIXS:0000838	train_stat_loc	0..1 TrainStatLocEnum	The train station collection location
MIXS:0000839	train_stop_loc	0..1 TrainStopLocEnum	The train stop collection location
MIXS:0000840	vis_media	0..1 String	The building visual media
MIXS:0000198	wall_area	0..1 String	The total area of the sampled room's walls
MIXS:0000841	wall_const_type	0..1 WallConstTypeEnum	The building class of the wall defined by the composition of the building ele...
MIXS:0000842	wall_finish_mat	0..1 WallFinishMatEnum	The material utilized to finish the outer most layer of the wall
MIXS:0000221	wall_height	0..1 String	The average height of the walls in the sampled room
MIXS:0000843	wall_loc	0..1 CompassDirections8Enum	The relative location of the wall within the room
MIXS:0000844	wall_water_mold	0..1 MoldVisibilityEnum	Signs of the presence of mold or mildew on a wall
MIXS:0000845	wall_surf_treatment	0..1 WallSurfTreatmentEnum	The surface treatment of interior wall
MIXS:0000846	wall_texture	0..1 CeilingWallTextureEnum	The feel, appearance, or consistency of a wall surface
MIXS:0000222	wall_thermal_mass	0..1 String	The ability of the wall to provide inertia against temperature fluctuations
MIXS:0000223	water_feat_size	0..1 String	The size of the water feature
MIXS:0000847	water_feat_type	0..1 WaterFeatTypeEnum	The type of water feature present within the building being sampled
MIXS:0000848	weekday	0..1 WeekdayEnum	The day of the week when sampling occurred
MIXS:0000224	window_size	0..1 String	The window's length and width
MIXS:0000849	window_cond	0..1 DamagedRupturedEnum	The physical condition of the window at the time of sampling
MIXS:0000850	window_cover	0..1 WindowCoverEnum	The type of window covering
MIXS:0000851	window_horiz_pos	0..1 WindowHorizPosEnum	The horizontal position of the window on the wall
MIXS:0000852	window_loc	0..1 CompassDirections8Enum	The relative location of the window within the room
MIXS:0000853	window_mat	0..1 WindowMatEnum	The type of material used to finish a window
MIXS:0000246	window_open_freq	0..1 Integer	The number of times windows are opened per week
MIXS:0000854	window_water_mold	0..1 MoldVisibilityEnum	Signs of the presence of mold or mildew on the window
MIXS:0000855	window_status	0..1 WindowStatusEnum	Defines whether the windows were open or closed during environmental testing
MIXS:0000856	window_type	0..1 WindowTypeEnum	The type of windows
MIXS:0000857	window_vert_pos	0..1 WindowVertPosEnum	The vertical position of the window on the wall

LinkML Source

Direct

name: MiuvigBuiltEnvironment
description: MIxS Data that comply with the Miuvig checklist and the BuiltEnvironment
  Extension
title: Miuvig combined with BuiltEnvironment
in_subset:
- combination_classes
from_schema: https://w3id.org/mixs
is_a: BuiltEnvironment
mixins:
- Miuvig
class_uri: MIXS:0010012_0016001

Induced

name: MiuvigBuiltEnvironment
description: MIxS Data that comply with the Miuvig checklist and the BuiltEnvironment
  Extension
title: Miuvig combined with BuiltEnvironment
in_subset:
- combination_classes
from_schema: https://w3id.org/mixs
is_a: BuiltEnvironment
mixins:
- Miuvig
attributes:
  samp_name:
    name: samp_name
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: ''
    description: A local identifier or name that for the material sample used for
      extracting nucleic acids, and subsequent sequencing. It can refer either to
      the original material collected or to any derived sub-samples. It can have any
      format, but we suggest that you make it concise, unique and consistent within
      your lab, and as informative as possible. INSDC requires every sample name from
      a single Submitter to be unique. Use of a globally unique identifier for the
      field source_mat_id is recommended in addition to sample_name
    title: sample name
    examples:
    - value: ISDsoil1
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - sample
    slot_uri: MIXS:0001107
    alias: samp_name
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
  size_frac:
    name: size_frac
    annotations:
      Expected_value:
        tag: Expected_value
        value: filter size value range
    description: Filtering pore size used in sample preparation
    title: size fraction selected
    examples:
    - value: 0-0.22 micrometer
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - fraction
    - size
    string_serialization: '{float}-{float} {unit}'
    slot_uri: MIXS:0000017
    alias: size_frac
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
  lib_screen:
    name: lib_screen
    annotations:
      Expected_value:
        tag: Expected_value
        value: screening strategy name
    description: Specific enrichment or screening methods applied before and/or after
      creating libraries
    title: library screening strategy
    examples:
    - value: enriched, screened, normalized
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - library
    slot_uri: MIXS:0000043
    alias: lib_screen
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
  source_uvig:
    name: source_uvig
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: Type of dataset from which the UViG was obtained
    title: source of UViGs
    examples:
    - value: viral fraction metagenome (virome)
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - source
    string_serialization: '[metagenome (not viral targeted)|viral fraction metagenome
      (virome)|sequence-targeted metagenome|metatranscriptome (not viral targeted)|viral
      fraction RNA metagenome (RNA virome)|sequence-targeted RNA metagenome|microbial
      single amplified genome (SAG)|viral single amplified genome (vSAG)|isolate microbial
      genome|other]'
    slot_uri: MIXS:0000035
    alias: source_uvig
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    required: true
  ref_db:
    name: ref_db
    annotations:
      Expected_value:
        tag: Expected_value
        value: names, versions, and references of databases
    description: List of database(s) used for ORF annotation, along with version number
      and reference to website or publication
    title: reference database(s)
    examples:
    - value: pVOGs;5;http://dmk-brain.ecn.uiowa.edu/pVOGs/ Grazziotin et al. 2017
        doi:10.1093/nar/gkw975
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - database
    string_serialization: '{database};{version};{reference}'
    slot_uri: MIXS:0000062
    alias: ref_db
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
  nucl_acid_amp:
    name: nucl_acid_amp
    description: A link to a literature reference, electronic resource or a standard
      operating procedure (SOP), that describes the enzymatic amplification (PCR,
      TMA, NASBA) of specific nucleic acids
    title: nucleic acid amplification
    examples:
    - value: https://phylogenomics.me/protocols/16s-pcr-protocol/
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000038
    alias: nucl_acid_amp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
    pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
    structured_pattern:
      syntax: ^{PMID}|{DOI}|{URL}$
      interpolated: true
      partial_match: true
  lib_size:
    name: lib_size
    description: Total number of clones in the library prepared for the project
    title: library size
    examples:
    - value: '50'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - library
    - size
    slot_uri: MIXS:0000039
    alias: lib_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: integer
    recommended: true
  mid:
    name: mid
    description: Molecular barcodes, called Multiplex Identifiers (MIDs), that are
      used to specifically tag unique samples in a sequencing run. Sequence should
      be reported in uppercase letters
    title: multiplex identifiers
    examples:
    - value: GTGAATAT
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    slot_uri: MIXS:0000047
    alias: mid
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
    pattern: ^[ACGTRKSYMWBHDVN]+$
    structured_pattern:
      syntax: ^{ambiguous_nucleotides}$
      interpolated: true
      partial_match: true
  assembly_name:
    name: assembly_name
    annotations:
      Expected_value:
        tag: Expected_value
        value: name and version of assembly
    description: Name/version of the assembly provided by the submitter that is used
      in the genome browsers and in the community
    title: assembly name
    examples:
    - value: HuRef, JCVI_ISG_i3_1.0
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    string_serialization: '{text} {text}'
    slot_uri: MIXS:0000057
    alias: assembly_name
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
  temp:
    name: temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: Temperature of the sample at the time of sampling
    title: temperature
    examples:
    - value: 25 degree Celsius
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - temperature
    slot_uri: MIXS:0000113
    alias: temp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  compl_score:
    name: compl_score
    annotations:
      Expected_value:
        tag: Expected_value
        value: quality;percent completeness
    description: 'Completeness score is typically based on either the fraction of
      markers found as compared to a database or the percent of a genome found as
      compared to a closely related reference genome. High Quality Draft: >90%, Medium
      Quality Draft: >50%, and Low Quality Draft: < 50% should have the indicated
      completeness scores'
    title: completeness score
    examples:
    - value: med;60%
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - score
    string_serialization: '[high|med|low];{percentage}'
    slot_uri: MIXS:0000069
    alias: compl_score
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Misag
    - Miuvig
    range: string
    recommended: true
  trnas:
    name: trnas
    annotations:
      Expected_value:
        tag: Expected_value
        value: value from 0-21
    description: The total number of tRNAs identified from the SAG or MAG
    title: number of standard tRNAs extracted
    examples:
    - value: '18'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - number
    string_serialization: '{integer}'
    slot_uri: MIXS:0000067
    alias: trnas
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Misag
    - Miuvig
    range: string
  nucl_acid_ext:
    name: nucl_acid_ext
    description: A link to a literature reference, electronic resource or a standard
      operating procedure (SOP), that describes the material separation to recover
      the nucleic acid fraction from a sample
    title: nucleic acid extraction
    examples:
    - value: https://mobio.com/media/wysiwyg/pdfs/protocols/12888.pdf
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000037
    alias: nucl_acid_ext
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    recommended: true
    pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
    structured_pattern:
      syntax: ^{PMID}|{DOI}|{URL}$
      interpolated: true
      partial_match: true
  samp_size:
    name: samp_size
    description: The total amount or size (volume (ml), mass (g) or area (m2) ) of
      sample collected
    title: amount or size of sample collected
    examples:
    - value: 5 liter
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - sample
    - size
    slot_uri: MIXS:0000001
    alias: samp_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  alt:
    name: alt
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: Heights of objects such as airplanes, space shuttles, rockets, atmospheric
      balloons and heights of places such as atmospheric layers and clouds. It is
      used to measure the height of an object which is above the earth's surface.
      In this context, the altitude measurement is the vertical distance between the
      earth's surface above sea level and the sampled position in the air
    title: altitude
    examples:
    - value: 100 meter
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000094
    alias: alt
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Air
    - HostAssociated
    - MiscellaneousNaturalOrArtificialEnvironment
    - SymbiontAssociated
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  estimated_size:
    name: estimated_size
    annotations:
      Expected_value:
        tag: Expected_value
        value: number of base pairs
    description: The estimated size of the genome prior to sequencing. Of particular
      importance in the sequencing of (eukaryotic) genome which could remain in draft
      form for a long or unspecified period
    title: estimated size
    examples:
    - value: 300000 bp
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - size
    string_serialization: '{integer} bp'
    slot_uri: MIXS:0000024
    alias: estimated_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Miuvig
    range: string
  source_mat_id:
    name: source_mat_id
    annotations:
      Expected_value:
        tag: Expected_value
        value: 'for cultures of microorganisms: identifiers for two culture collections;
          for other material a unique arbitrary identifer'
    description: A unique identifier assigned to a material sample (as defined by
      http://rs.tdwg.org/dwc/terms/materialSampleID, and as opposed to a particular
      digital record of a material sample) used for extracting nucleic acids, and
      subsequent sequencing. The identifier can refer either to the original material
      collected or to any derived sub-samples. The INSDC qualifiers /specimen_voucher,
      /bio_material, or /culture_collection may or may not share the same value as
      the source_mat_id field. For instance, the /specimen_voucher qualifier and source_mat_id
      may both contain 'UAM:Herps:14' , referring to both the specimen voucher and
      sampled tissue with the same identifier. However, the /culture_collection qualifier
      may refer to a value from an initial culture (e.g. ATCC:11775) while source_mat_id
      would refer to an identifier from some derived culture from which the nucleic
      acids were extracted (e.g. xatc123 or ark:/2154/R2)
    title: source material identifiers
    examples:
    - value: MPI012345
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    - material
    - source
    slot_uri: MIXS:0000026
    alias: source_mat_id
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - SymbiontAssociated
    range: string
    recommended: true
    multivalued: true
  samp_vol_we_dna_ext:
    name: samp_vol_we_dna_ext
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: milliliter, gram, milligram, square centimeter
    description: 'Volume (ml) or mass (g) of total collected sample processed for
      DNA extraction. Note: total sample collected should be entered under the term
      Sample Size (MIXS:0000001)'
    title: sample volume or weight for DNA extraction
    examples:
    - value: 1500 milliliter
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - dna
    - sample
    - volume
    - weight
    slot_uri: MIXS:0000111
    alias: samp_vol_we_dna_ext
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  pathogenicity:
    name: pathogenicity
    annotations:
      Expected_value:
        tag: Expected_value
        value: names of organisms that the entity is pathogenic to
    description: To what is the entity pathogenic
    title: known pathogenicity
    examples:
    - value: human, animal, plant, fungi, bacteria
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000027
    alias: pathogenicity
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsVi
    - Miuvig
    - Agriculture
    range: string
  lib_reads_seqd:
    name: lib_reads_seqd
    description: Total number of clones sequenced from the library
    title: library reads sequenced
    examples:
    - value: '20'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - library
    slot_uri: MIXS:0000040
    alias: lib_reads_seqd
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: integer
    recommended: true
  samp_collect_device:
    name: samp_collect_device
    annotations:
      Expected_value:
        tag: Expected_value
        value: device name
    description: The device used to collect an environmental sample. This field accepts
      terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
      This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094)
    title: sample collection device
    examples:
    - value: swab, biopsy, niskin bottle, push core, drag swab [GENEPIO:0002713]
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - device
    - sample
    string_serialization: '{termLabel} [{termID}]|{text}'
    slot_uri: MIXS:0000002
    alias: samp_collect_device
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    recommended: true
  number_contig:
    name: number_contig
    description: Total number of contigs in the cleaned/submitted assembly that makes
      up a given genome, SAG, MAG, or UViG
    title: number of contigs
    examples:
    - value: '40'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - number
    slot_uri: MIXS:0000060
    alias: number_contig
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: integer
    required: true
  biotic_relationship:
    name: biotic_relationship
    description: Description of relationship(s) between the subject organism and other
      organism(s) it is associated with. E.g., parasite on species X; mutualist with
      species Y. The target organism is the subject of the relationship, and the other
      organism(s) is the object
    title: observed biotic relationship
    examples:
    - value: free living
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - observed
    - relationship
    slot_uri: MIXS:0000028
    alias: biotic_relationship
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsVi
    - MimarksC
    - Miuvig
    - Agriculture
    range: BioticRelationshipEnum
  trna_ext_software:
    name: trna_ext_software
    description: Tools used for tRNA identification
    title: tRNA extraction software
    examples:
    - value: infernal;v2;default parameters
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - software
    slot_uri: MIXS:0000068
    alias: trna_ext_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Misag
    - Miuvig
    range: string
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{software};{version};{parameters}$
      interpolated: true
      partial_match: true
  lib_layout:
    name: lib_layout
    description: Specify whether to expect single, paired, or other configuration
      of reads
    title: library layout
    examples:
    - value: paired
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - library
    slot_uri: MIXS:0000041
    alias: lib_layout
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: LibLayoutEnum
    recommended: true
  assembly_qual:
    name: assembly_qual
    description: 'The assembly quality category is based on sets of criteria outlined
      for each assembly quality category. For MISAG/MIMAG; Finished: Single, validated,
      contiguous sequence per replicon without gaps or ambiguities with a consensus
      error rate equivalent to Q50 or better. High Quality Draft:Multiple fragments
      where gaps span repetitive regions. Presence of the large subunit (LSU) RNA,
      small subunit (SSU) and the presence of 5.8S rRNA or 5S rRNA depending on whether
      it is a eukaryotic or prokaryotic genome, respectively. Medium Quality Draft:Many
      fragments with little to no review of assembly other than reporting of standard
      assembly statistics. Low Quality Draft:Many fragments with little to no review
      of assembly other than reporting of standard assembly statistics. Assembly statistics
      include, but are not limited to total assembly size, number of contigs, contig
      N50/L50, and maximum contig length. For MIUVIG; Finished: Single, validated,
      contiguous sequence per replicon without gaps or ambiguities, with extensive
      manual review and editing to annotate putative gene functions and transcriptional
      units. High-quality draft genome: One or multiple fragments, totaling   90%
      of the expected genome or replicon sequence or predicted complete. Genome fragment(s):
      One or multiple fragments, totalling < 90% of the expected genome or replicon
      sequence, or for which no genome size could be estimated'
    title: assembly quality
    examples:
    - value: High-quality draft genome
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - quality
    slot_uri: MIXS:0000056
    alias: assembly_qual
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: AssemblyQualEnum
    required: true
  ref_biomaterial:
    name: ref_biomaterial
    description: Primary publication if isolated before genome publication; otherwise,
      primary genome report
    title: reference for biomaterial
    examples:
    - value: doi:10.1016/j.syapm.2018.01.009
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000025
    alias: ref_biomaterial
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: string
    pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
    structured_pattern:
      syntax: ^{PMID}|{DOI}|{URL}$
      interpolated: true
      partial_match: true
  project_name:
    name: project_name
    description: Name of the project within which the sequencing was organized
    title: project name
    examples:
    - value: Forest soil metagenome
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - project
    slot_uri: MIXS:0000092
    alias: project_name
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
  lib_vector:
    name: lib_vector
    annotations:
      Expected_value:
        tag: Expected_value
        value: vector
    description: Cloning vector type(s) used in construction of libraries
    title: library vector
    examples:
    - value: Bacteriophage P1
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - library
    slot_uri: MIXS:0000042
    alias: lib_vector
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
  host_spec_range:
    name: host_spec_range
    annotations:
      Expected_value:
        tag: Expected_value
        value: NCBI taxid
    description: The range and diversity of host species that an organism is capable
      of infecting, defined by NCBI taxonomy identifier
    title: host specificity or range
    examples:
    - value: '9606'
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - host
    - host.
    - range
    string_serialization: '{integer}'
    slot_uri: MIXS:0000030
    alias: host_spec_range
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsPl
    - MigsVi
    - Miuvig
    - Agriculture
    range: string
    multivalued: true
  neg_cont_type:
    name: neg_cont_type
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration or text
    description: The substance or equipment used as a negative control in an investigation
    title: negative control type
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0001321
    alias: neg_cont_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: NegContTypeEnum
    recommended: true
  virus_enrich_appr:
    name: virus_enrich_appr
    description: List of approaches used to enrich the sample for viruses, if any
    title: virus enrichment approach
    examples:
    - value: filtration
      description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
    - value: FeCl Precipitation
      description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
    - value: ultracentrifugation
      description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
    - value: DNAse
      description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - enrichment
    slot_uri: MIXS:0000036
    alias: virus_enrich_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsVi
    - Miuvig
    range: VirusEnrichApprEnum
    required: true
  adapters:
    name: adapters
    description: Adapters provide priming sequences for both amplification and sequencing
      of the sample-library fragments. Both adapters should be reported; in uppercase
      letters
    title: adapters
    examples:
    - value: AATGATACGGCGACCACCGAGATCTACACGCT;CAAGCAGAAGACGGCATACGAGAT
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000048
    alias: adapters
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
    structured_pattern:
      syntax: ^{adapter_A_DNA_sequence};{adapter_B_DNA_sequence}$
      interpolated: true
      partial_match: true
  assembly_software:
    name: assembly_software
    description: Tool(s) used for assembly, including version number and parameters
    title: assembly software
    examples:
    - value: metaSPAdes;3.11.0;kmer set 21,33,55,77,99,121, default parameters otherwise
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - software
    slot_uri: MIXS:0000058
    alias: assembly_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    required: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{software};{version};{parameters}$
      interpolated: true
      partial_match: true
  tax_ident:
    name: tax_ident
    description: The phylogenetic marker(s) used to assign an organism name to the
      SAG or MAG
    title: taxonomic identity marker
    examples:
    - value: other
      description: was other <colon> rpoB gene
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    - marker
    - taxon
    slot_uri: MIXS:0000053
    alias: tax_ident
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Misag
    - Miuvig
    range: TaxIdentEnum
  annot:
    name: annot
    annotations:
      Expected_value:
        tag: Expected_value
        value: name of tool or pipeline used, or annotation source description
    description: Tool used for annotation, or for cases where annotation was provided
      by a community jamboree or model organism database rather than by a specific
      submitter
    title: annotation
    examples:
    - value: prokka
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000059
    alias: annot
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
  pos_cont_type:
    name: pos_cont_type
    description: The substance, mixture, product, or apparatus used to verify that
      a process which is part of an investigation delivers a true positive
    title: positive control type
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    string_serialization: '{term} or {text}'
    slot_uri: MIXS:0001322
    alias: pos_cont_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
  feat_pred:
    name: feat_pred
    description: Method used to predict UViGs features such as ORFs, integration site,
      etc
    title: feature prediction
    examples:
    - value: Prodigal;2.6.3;default parameters
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - feature
    - predict
    slot_uri: MIXS:0000061
    alias: feat_pred
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{software};{version};{parameters}$
      interpolated: true
      partial_match: true
  compl_software:
    name: compl_software
    annotations:
      Expected_value:
        tag: Expected_value
        value: names and versions of software(s) used
    description: Tools used for completion estimate, i.e. checkm, anvi'o, busco
    title: completeness software
    examples:
    - value: checkm
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - software
    string_serialization: '{software};{version}'
    slot_uri: MIXS:0000070
    alias: compl_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Misag
    - Miuvig
    range: string
  env_local_scale:
    name: env_local_scale
    annotations:
      Expected_value:
        tag: Expected_value
        value: Environmental entities having causal influences upon the entity at
          time of sampling
    description: 'Report the entity or entities which are in the sample or specimen
      s local vicinity and which you believe have significant causal influences on
      your sample or specimen. We recommend using EnvO terms which are of smaller
      spatial grain than your entry for env_broad_scale. Terms, such as anatomical
      sites, from other OBO Library ontologies which interoperate with EnvO (e.g.
      UBERON) are accepted in this field. EnvO documentation about how to use the
      field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS'
    title: local environmental context
    examples:
    - value: hillside [ENVO:01000333]
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - context
    - environmental
    slot_uri: MIXS:0000013
    alias: env_local_scale
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    required: true
    structured_pattern:
      syntax: ^{termLabel} \[{termID}\]$
      interpolated: true
      partial_match: true
  samp_mat_process:
    name: samp_mat_process
    description: A brief description of any processing applied to the sample during
      or after retrieving the sample from environment, or a link to the relevant protocol(s)
      performed
    title: sample material processing
    examples:
    - value: filtering of seawater, storing samples in ethanol
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - material
    - process
    - sample
    slot_uri: MIXS:0000016
    alias: samp_mat_process
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
  sim_search_meth:
    name: sim_search_meth
    description: Tool used to compare ORFs with database, along with version and cutoffs
      used
    title: similarity search method
    examples:
    - value: HMMER3;3.1b2;hmmsearch, cutoff of 50 on score
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - method
    slot_uri: MIXS:0000063
    alias: sim_search_meth
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{software};{version};{parameters}$
      interpolated: true
      partial_match: true
  host_disease_stat:
    name: host_disease_stat
    annotations:
      Expected_value:
        tag: Expected_value
        value: disease name or Disease Ontology term
    description: List of diseases with which the host has been diagnosed; can include
      multiple diagnoses. The value of the field depends on host; for humans the terms
      should be chosen from the DO (Human Disease Ontology) at https://www.disease-ontology.org,
      non-human host diseases are free text
    title: host disease status
    examples:
    - value: rabies [DOID:11260]
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - disease
    - host
    - host.
    - status
    string_serialization: '{termLabel} [{termID}]|{text}'
    slot_uri: MIXS:0000031
    alias: host_disease_stat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsVi
    - Miuvig
    - Agriculture
    - FoodFarmEnvironment
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - PlantAssociated
    range: string
    recommended: true
  depth:
    name: depth
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: The vertical distance below local surface. For sediment or soil samples
      depth is measured from sediment or soil surface, respectively. Depth can be
      reported as an interval for subsurface samples
    title: depth
    examples:
    - value: 10 meter
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - depth
    slot_uri: MIXS:0000018
    alias: depth
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodFarmEnvironment
    - HostAssociated
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  samp_collect_method:
    name: samp_collect_method
    description: The method employed for collecting the sample
    title: sample collection method
    examples:
    - value: swabbing
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - method
    - sample
    slot_uri: MIXS:0001225
    alias: samp_collect_method
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodAnimalAndAnimalFeed
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    recommended: true
    pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{PMID}|{DOI}|{URL}|{text}$
      interpolated: true
      partial_match: true
  compl_appr:
    name: compl_appr
    annotations:
      Expected_value:
        tag: Expected_value
        value: text
    description: The approach used to determine the completeness of a given genomic
      assembly, which would typically make use of a set of conserved marker genes
      or a closely related reference genome. For UViG completeness, include reference
      genome or group used, and contig feature suggesting a complete genome
    title: completeness approach
    examples:
    - value: other
      description: was other <colon> UViG length compared to the average length of
        reference genomes from the P22virus genus (NCBI RefSeq v83)
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000071
    alias: compl_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Misag
    - Miuvig
    range: ComplApprEnum
    recommended: true
  specific_host:
    name: specific_host
    annotations:
      Expected_value:
        tag: Expected_value
        value: host scientific name, taxonomy ID
    description: Report the host's taxonomic name and/or NCBI taxonomy ID
    title: host scientific name
    examples:
    - value: Homo sapiens and/or 9606
    in_subset:
    - nucleic acid sequence source
    from_schema: https://w3id.org/mixs
    keywords:
    - host
    - host.
    string_serialization: '{text}|{NCBI taxid}'
    slot_uri: MIXS:0000029
    alias: specific_host
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsPl
    - MigsVi
    - Miuvig
    - Agriculture
    range: string
  env_medium:
    name: env_medium
    description: 'Report the environmental material(s) immediately surrounding the
      sample or specimen at the time of sampling. We recommend using subclasses of
      ''environmental material'' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO
      documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
      . Terms from other OBO ontologies are permissible as long as they reference
      mass/volume nouns (e.g. air, water, blood) and not discrete, countable entities
      (e.g. a tree, a leaf, a table top)'
    title: environmental medium
    examples:
    - value: bluegrass field soil [ENVO:00005789]
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - environmental
    slot_uri: MIXS:0000014
    alias: env_medium
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    required: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
    structured_pattern:
      syntax: ^{termLabel} \[{termID}\]$
      interpolated: true
      partial_match: true
  samp_taxon_id:
    name: samp_taxon_id
    description: NCBI taxon id of the sample.  Maybe be a single taxon or mixed taxa
      sample. Use 'synthetic metagenome  for mock community/positive controls, or
      'blank sample' for negative controls
    title: taxonomy ID of DNA sample
    examples:
    - value: Gut Metagenome [NCBITaxon:749906]
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - dna
    - identifier
    - sample
    - taxon
    slot_uri: MIXS:0001320
    alias: samp_taxon_id
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    required: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[NCBITaxon:\d+\]$
    structured_pattern:
      syntax: ^{text} \[{NCBItaxon_id}\]$
      interpolated: true
      partial_match: true
  geo_loc_name:
    name: geo_loc_name
    description: The geographical origin of the sample as defined by the country or
      sea name followed by specific region name. Country or sea names should be chosen
      from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology
      (http://purl.bioontology.org/ontology/GAZ)
    title: geographic location (country and/or sea,region)
    examples:
    - value: 'USA: Maryland, Bethesda'
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - geographic
    - location
    slot_uri: MIXS:0000010
    alias: geo_loc_name
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - SymbiontAssociated
    range: string
    required: true
    pattern: '^([^\s-]{1,2}|[^\s-]+.+[^\s-]+): ([^\s-]{1,2}|[^\s-]+.+[^\s-]+), ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$'
    structured_pattern:
      syntax: '^{text}: {text}, {text}$'
      interpolated: true
      partial_match: true
  collection_date:
    name: collection_date
    description: 'The time of sampling, either as an instance (single point in time)
      or interval. In case no exact time is available, the date/time can be right
      truncated i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10;
      2008-01-23; 2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant'
    title: collection date
    examples:
    - value: '2013-03-25T12:42:31+01:00'
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - date
    slot_uri: MIXS:0000011
    alias: collection_date
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - SymbiontAssociated
    range: datetime
    required: true
  seq_meth:
    name: seq_meth
    description: Sequencing machine used. Where possible the term should be taken
      from the OBI list of DNA sequencers (http://purl.obolibrary.org/obo/OBI_0400103)
    title: sequencing method
    examples:
    - value: 454 Genome Sequencer FLX [OBI:0000702]
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - method
    slot_uri: MIXS:0000050
    alias: seq_meth
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    required: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
    structured_pattern:
      syntax: ^{text}|({termLabel} \[{termID}\])$
      interpolated: true
      partial_match: true
  lat_lon:
    name: lat_lon
    description: The geographical origin of the sample as defined by latitude and
      longitude. The values should be reported in decimal degrees, limited to 8 decimal
      points, and in WGS84 system
    title: geographic location (latitude and longitude)
    examples:
    - value: 50.586825 6.408977
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - geographic
    - location
    slot_uri: MIXS:0000009
    alias: lat_lon
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - SymbiontAssociated
    range: string
    required: true
    pattern: ^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$
    structured_pattern:
      syntax: ^{lat} {lon}$
      interpolated: true
      partial_match: true
  elev:
    name: elev
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: Elevation of the sampling site is its height above a fixed reference
      point, most commonly the mean sea level. Elevation is mainly used when referring
      to points on the earth's surface, while altitude is used for points above the
      surface, such as an aircraft in flight or a spacecraft in orbit
    title: elevation
    examples:
    - value: 100 meter
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - elevation
    slot_uri: MIXS:0000093
    alias: elev
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    - Air
    - HostAssociated
    - HydrocarbonResourcesCores
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - Soil
    - SymbiontAssociated
    - Water
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  env_broad_scale:
    name: env_broad_scale
    description: 'Report the major environmental system the sample or specimen came
      from. The system(s) identified should have a coarse spatial grain, to provide
      the general environmental context of where the sampling was done (e.g. in the
      desert or a rainforest). We recommend using subclasses of EnvO s biome class:  http://purl.obolibrary.org/obo/ENVO_00000428.
      EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS'
    title: broad-scale environmental context
    examples:
    - value: rangeland biome [ENVO:01000247]
    in_subset:
    - environment
    from_schema: https://w3id.org/mixs
    keywords:
    - context
    - environmental
    slot_uri: MIXS:0000012
    alias: env_broad_scale
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    range: string
    required: true
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
    structured_pattern:
      syntax: ^{termLabel} \[{termID}\]$
      interpolated: true
      partial_match: true
  tax_class:
    name: tax_class
    description: Method used for taxonomic classification, along with reference database
      used, classification rank, and thresholds used to classify new genomes
    title: taxonomic classification
    examples:
    - value: vConTACT vContact2 (references from NCBI RefSeq v83, genus rank classification,
        default parameters)
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - classification
    - taxon
    slot_uri: MIXS:0000064
    alias: tax_class
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - Mims
    - Misag
    - Miuvig
    range: string
    recommended: true
  experimental_factor:
    name: experimental_factor
    annotations:
      Expected_value:
        tag: Expected_value
        value: text or EFO and/or OBI
    description: Variable aspects of an experiment design that can be used to describe
      an experiment, or set of experiments, in an increasingly detailed manner. This
      field accepts ontology terms from Experimental Factor Ontology (EFO) and/or
      Ontology for Biomedical Investigations (OBI)
    title: experimental factor
    examples:
    - value: time series design [EFO:0001779]
    in_subset:
    - investigation
    from_schema: https://w3id.org/mixs
    keywords:
    - experimental
    - factor
    string_serialization: '{termLabel} [{termID}]|{text}'
    slot_uri: MIXS:0000008
    alias: experimental_factor
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - FoodAnimalAndAnimalFeed
    - FoodFoodProductionFacility
    - FoodHumanFoods
    range: string
    recommended: true
    multivalued: true
    pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$
  sort_tech:
    name: sort_tech
    description: Method used to sort/isolate cells or particles of interest
    title: sorting technology
    examples:
    - value: optical manipulation
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000075
    alias: sort_tech
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Misag
    - Miuvig
    range: SortTechEnum
    recommended: true
  sc_lysis_approach:
    name: sc_lysis_approach
    description: Method used to free DNA from interior of the cell(s) or particle(s)
    title: single cell or viral particle lysis approach
    examples:
    - value: enzymatic
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - particle
    - single
    slot_uri: MIXS:0000076
    alias: sc_lysis_approach
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Misag
    - Miuvig
    range: ScLysisApproachEnum
    recommended: true
  sc_lysis_method:
    name: sc_lysis_method
    annotations:
      Expected_value:
        tag: Expected_value
        value: kit, protocol name
    description: Name of the kit or standard protocol used for cell(s) or particle(s)
      lysis
    title: single cell or viral particle lysis kit protocol
    examples:
    - value: ambion single cell lysis kit
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - kit
    - particle
    - protocol
    - single
    slot_uri: MIXS:0000054
    alias: sc_lysis_method
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Misag
    - Miuvig
    range: string
    recommended: true
  wga_amp_appr:
    name: wga_amp_appr
    description: Method used to amplify genomic DNA in preparation for sequencing
    title: WGA amplification approach
    examples:
    - value: mda based
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000055
    alias: wga_amp_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Misag
    - Miuvig
    range: WgaAmpApprEnum
    recommended: true
  wga_amp_kit:
    name: wga_amp_kit
    annotations:
      Expected_value:
        tag: Expected_value
        value: kit name
    description: Kit used to amplify genomic DNA in preparation for sequencing
    title: WGA amplification kit
    examples:
    - value: qiagen repli-g
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - kit
    slot_uri: MIXS:0000006
    alias: wga_amp_kit
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Misag
    - Miuvig
    range: string
    recommended: true
  bin_param:
    name: bin_param
    description: The parameters that have been applied during the extraction of genomes
      from metagenomic datasets
    title: binning parameters
    examples:
    - value: coverage
      description: was 'coverage and kmer'
    - value: kmer
      description: was coverage and kmer
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - parameter
    slot_uri: MIXS:0000077
    alias: bin_param
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Miuvig
    range: BinParamEnum
    recommended: true
  bin_software:
    name: bin_software
    annotations:
      Expected_value:
        tag: Expected_value
        value: names and versions of software(s) used
    description: Tool(s) used for the extraction of genomes from metagenomic datasets,
      where possible include a product ID (PID) of the tool(s) used
    title: binning software
    examples:
    - value: MetaCluster-TA (RRID:SCR_004599), MaxBin (biotools:maxbin)
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - software
    string_serialization: '{software};{version}{PID}'
    slot_uri: MIXS:0000078
    alias: bin_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Miuvig
    range: string
    recommended: true
  reassembly_bin:
    name: reassembly_bin
    description: Has an assembly been performed on a genome bin extracted from a metagenomic
      assembly?
    title: reassembly post binning
    examples:
    - value: 'no'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - post
    slot_uri: MIXS:0000079
    alias: reassembly_bin
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Miuvig
    range: boolean
    recommended: true
  mag_cov_software:
    name: mag_cov_software
    description: Tool(s) used to determine the genome coverage if coverage is used
      as a binning parameter in the extraction of genomes from metagenomic datasets
    title: MAG coverage software
    examples:
    - value: bbmap
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - software
    slot_uri: MIXS:0000080
    alias: mag_cov_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Mimag
    - Miuvig
    range: MagCovSoftwareEnum
  vir_ident_software:
    name: vir_ident_software
    annotations:
      Expected_value:
        tag: Expected_value
        value: software name, version and relevant parameters
    description: Tool(s) used for the identification of UViG as a viral genome, software
      or protocol name including version number, parameters, and cutoffs used
    title: viral identification software
    examples:
    - value: VirSorter; 1.0.4; Virome database, category 2
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    - software
    string_serialization: '{software};{version};{parameters}'
    slot_uri: MIXS:0000081
    alias: vir_ident_software
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    required: true
  pred_genome_type:
    name: pred_genome_type
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: Type of genome predicted for the UViG
    title: predicted genome type
    examples:
    - value: dsDNA
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - predict
    - type
    string_serialization: '[DNA|dsDNA|ssDNA|RNA|dsRNA|ssRNA|ssRNA (+)|ssRNA (-)|mixed|uncharacterized]'
    slot_uri: MIXS:0000082
    alias: pred_genome_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    required: true
  pred_genome_struc:
    name: pred_genome_struc
    description: Expected structure of the viral genome
    title: predicted genome structure
    examples:
    - value: non-segmented
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - predict
    slot_uri: MIXS:0000083
    alias: pred_genome_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: PredGenomeStrucEnum
    required: true
  detec_type:
    name: detec_type
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: Type of UViG detection
    title: detection type
    examples:
    - value: independent sequence (UViG)
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    string_serialization: '[independent sequence (UViG)|provirus (UpViG)]'
    slot_uri: MIXS:0000084
    alias: detec_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    required: true
  otu_class_appr:
    name: otu_class_appr
    annotations:
      Expected_value:
        tag: Expected_value
        value: cutoffs and method used
    description: Cutoffs and approach used when clustering  species-level  OTUs. Note
      that results from standard 95% ANI / 85% AF clustering should be provided alongside
      OTUS defined from another set of thresholds, even if the latter are the ones
      primarily used during the analysis
    title: OTU classification approach
    examples:
    - value: 95% ANI;85% AF; greedy incremental clustering
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - classification
    - otu
    string_serialization: '{ANI cutoff};{AF cutoff};{clustering method}'
    slot_uri: MIXS:0000085
    alias: otu_class_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    recommended: true
  otu_seq_comp_appr:
    name: otu_seq_comp_appr
    annotations:
      Expected_value:
        tag: Expected_value
        value: software name, version and relevant parameters
    description: Tool and thresholds used to compare sequences when computing "species-level"
      OTUs
    title: OTU sequence comparison approach
    examples:
    - value: 'blastn;2.6.0+;e-value cutoff: 0.001'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - otu
    string_serialization: '{software};{version};{parameters}'
    slot_uri: MIXS:0000086
    alias: otu_seq_comp_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    recommended: true
  otu_db:
    name: otu_db
    annotations:
      Expected_value:
        tag: Expected_value
        value: database and version
    description: Reference database (i.e. sequences not generated as part of the current
      study) used to cluster new genomes in "species-level" OTUs, if any
    title: OTU database
    examples:
    - value: NCBI Viral RefSeq;83
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - database
    - otu
    string_serialization: '{database};{version}'
    slot_uri: MIXS:0000087
    alias: otu_db
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    recommended: true
  host_pred_appr:
    name: host_pred_appr
    description: Tool or approach used for host prediction
    title: host prediction approach
    examples:
    - value: CRISPR spacer match
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - host
    - host.
    - predict
    slot_uri: MIXS:0000088
    alias: host_pred_appr
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: HostPredApprEnum
    recommended: true
  host_pred_est_acc:
    name: host_pred_est_acc
    description: For each tool or approach used for host prediction, estimated false
      discovery rates should be included, either computed de novo or from the literature
    title: host prediction estimated accuracy
    examples:
    - value: 'CRISPR spacer match: 0 or 1 mismatches, estimated 8% FDR at the host
        genus rank (Edwards et al. 2016 doi:10.1093/femsre/fuv048)'
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - host
    - host.
    - predict
    slot_uri: MIXS:0000089
    alias: host_pred_est_acc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Miuvig
    range: string
    recommended: true
  associated_resource:
    name: associated_resource
    annotations:
      Expected_value:
        tag: Expected_value
        value: reference to resource
    description: A related resource that is referenced, cited, or otherwise associated
      to the sequence
    title: relevant electronic resources
    examples:
    - value: http://www.earthmicrobiome.org/
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - resource
    string_serialization: '{PMID}|{DOI}|{URL}'
    slot_uri: MIXS:0000091
    alias: associated_resource
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
    multivalued: true
  sop:
    name: sop
    annotations:
      Expected_value:
        tag: Expected_value
        value: reference to SOP
    description: Standard operating procedures used in assembly and/or annotation
      of genomes, metagenomes or environmental sequences
    title: relevant standard operating procedures
    examples:
    - value: http://press.igsb.anl.gov/earthmicrobiome/protocols-and-standards/its/
    in_subset:
    - sequencing
    from_schema: https://w3id.org/mixs
    keywords:
    - procedures
    string_serialization: '{PMID}|{DOI}|{URL}'
    slot_uri: MIXS:0000090
    alias: sop
    owner: MiuvigBuiltEnvironment
    domain_of:
    - MigsBa
    - MigsEu
    - MigsOrg
    - MigsPl
    - MigsVi
    - Mimag
    - MimarksC
    - MimarksS
    - Mims
    - Misag
    - Miuvig
    - Agriculture
    range: string
    recommended: true
    multivalued: true
  surf_material:
    name: surf_material
    description: Surface materials at the point of sampling
    title: surface material
    examples:
    - value: wood
    from_schema: https://w3id.org/mixs
    keywords:
    - material
    - surface
    slot_uri: MIXS:0000758
    alias: surf_material
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: SurfMaterialEnum
    required: true
    recommended: true
  surf_air_cont:
    name: surf_air_cont
    description: Contaminant identified on surface
    title: surface-air contaminant
    examples:
    - value: radon
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000759
    alias: surf_air_cont
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SurfAirContEnum
    recommended: true
    multivalued: true
  rel_air_humidity:
    name: rel_air_humidity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: percentage
    description: Partial vapor and air pressure, density of the vapor and air, or
      by the actual mass of the vapor and air
    title: relative air humidity
    comments:
    - percent or float?
    examples:
    - value: '0.8'
    from_schema: https://w3id.org/mixs
    keywords:
    - air
    - humidity
    - relative
    slot_uri: MIXS:0000121
    alias: rel_air_humidity
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    required: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  abs_air_humidity:
    name: abs_air_humidity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: gram per gram, kilogram per kilogram, kilogram, pound
    description: Actual mass of water vapor - mh20 - present in the air water vapor
      mixture
    title: absolute air humidity
    examples:
    - value: 9 gram per gram
    from_schema: https://w3id.org/mixs
    keywords:
    - absolute
    - air
    - humidity
    slot_uri: MIXS:0000122
    alias: abs_air_humidity
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    required: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  surf_humidity:
    name: surf_humidity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: percentage
    description: 'Surfaces: water activity as a function of air and material moisture'
    title: surface humidity
    comments:
    - percent or float?
    examples:
    - value: '0.1'
    from_schema: https://w3id.org/mixs
    keywords:
    - humidity
    - surface
    slot_uri: MIXS:0000123
    alias: surf_humidity
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  air_temp:
    name: air_temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: Temperature of the air at the time of sampling
    title: air temperature
    examples:
    - value: 20 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - air
    - temperature
    slot_uri: MIXS:0000124
    alias: air_temp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: string
    required: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  surf_temp:
    name: surf_temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: Temperature of the surface at the time of sampling
    title: surface temperature
    examples:
    - value: 15 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - surface
    - temperature
    slot_uri: MIXS:0000125
    alias: surf_temp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  surf_moisture_ph:
    name: surf_moisture_ph
    description: ph measurement of surface
    title: surface moisture pH
    examples:
    - value: '7'
    from_schema: https://w3id.org/mixs
    keywords:
    - moisture
    - ph
    - surface
    slot_uri: MIXS:0000760
    alias: surf_moisture_ph
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    recommended: true
  build_occup_type:
    name: build_occup_type
    description: The primary function for which a building or discrete part of a building
      is intended to be used
    title: building occupancy type
    examples:
    - value: market
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000761
    alias: build_occup_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: BuildOccupTypeEnum
    required: true
    multivalued: true
  surf_moisture:
    name: surf_moisture
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: parts per million, gram per cubic meter, gram per square meter
    description: Water held on a surface
    title: surface moisture
    examples:
    - value: 0.01 gram per square meter
    from_schema: https://w3id.org/mixs
    keywords:
    - moisture
    - surface
    slot_uri: MIXS:0000128
    alias: surf_moisture
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    recommended: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  dew_point:
    name: dew_point
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: The temperature to which a given parcel of humid air must be cooled,
      at constant barometric pressure, for water vapor to condense into water
    title: dew point
    examples:
    - value: 22 degree Celsius
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000129
    alias: dew_point
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  carb_dioxide:
    name: carb_dioxide
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: micromole per liter, parts per million
    description: Carbon dioxide (gas) amount or concentration at the time of sampling
    title: carbon dioxide
    examples:
    - value: 410 parts per million
    from_schema: https://w3id.org/mixs
    keywords:
    - carbon
    slot_uri: MIXS:0000097
    alias: carb_dioxide
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Air
    - BuiltEnvironment
    range: string
    required: true
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  ventilation_type:
    name: ventilation_type
    annotations:
      Expected_value:
        tag: Expected_value
        value: ventilation type name
    description: Ventilation system used in the sampled premises
    title: ventilation type
    examples:
    - value: Operable windows
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000756
    alias: ventilation_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Air
    - BuiltEnvironment
    - FoodFarmEnvironment
    range: string
    required: true
    multivalued: true
  organism_count:
    name: organism_count
    annotations:
      Expected_value:
        tag: Expected_value
        value: organism name;measurement value;enumeration
    description: 'Total cell count of any organism (or group of organisms) per gram,
      volume or area of sample, should include name of organism followed by count.
      The method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should
      also be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)'
    title: organism count
    examples:
    - value: total prokaryotes;3.5e7 cells per milliliter;qPCR
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - organism
    string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|other]'
    slot_uri: MIXS:0000103
    alias: organism_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Agriculture
    - Air
    - BuiltEnvironment
    - FoodAnimalAndAnimalFeed
    - FoodFarmEnvironment
    - FoodFoodProductionFacility
    - FoodHumanFoods
    - HostAssociated
    - HumanAssociated
    - HumanGut
    - HumanOral
    - HumanSkin
    - HumanVaginal
    - HydrocarbonResourcesCores
    - HydrocarbonResourcesFluidsSwabs
    - MicrobialMatBiofilm
    - MiscellaneousNaturalOrArtificialEnvironment
    - PlantAssociated
    - Sediment
    - SymbiontAssociated
    - WastewaterSludge
    - Water
    range: string
    required: true
    multivalued: true
  indoor_space:
    name: indoor_space
    description: A distinguishable space within a structure, the purpose for which
      discrete areas of a building is used
    title: indoor space
    examples:
    - value: foyer
    from_schema: https://w3id.org/mixs
    keywords:
    - indoor
    slot_uri: MIXS:0000763
    alias: indoor_space
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: IndoorSpaceEnum
    required: true
  indoor_surf:
    name: indoor_surf
    description: Type of indoor surface
    title: indoor surface
    examples:
    - value: wall
    from_schema: https://w3id.org/mixs
    keywords:
    - indoor
    - surface
    slot_uri: MIXS:0000764
    alias: indoor_surf
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: IndoorSurfEnum
    required: true
    recommended: true
  filter_type:
    name: filter_type
    description: A device which removes solid particulates or airborne molecular contaminants
    title: filter type
    examples:
    - value: HEPA
    from_schema: https://w3id.org/mixs
    keywords:
    - filter
    - type
    slot_uri: MIXS:0000765
    alias: filter_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: FilterTypeEnum
    required: true
    multivalued: true
  heat_cool_type:
    name: heat_cool_type
    description: Methods of conditioning or heating a room or building
    title: heating and cooling system type
    examples:
    - value: heat pump
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000766
    alias: heat_cool_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: HeatCoolTypeEnum
    required: true
    multivalued: true
  substructure_type:
    name: substructure_type
    description: The substructure or under building is that largely hidden section
      of the building which is built off the foundations to the ground floor level
    title: substructure type
    examples:
    - value: basement
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000767
    alias: substructure_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SubstructureTypeEnum
    multivalued: true
  building_setting:
    name: building_setting
    description: A location (geography) where a building is set
    title: building setting
    examples:
    - value: rural
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000768
    alias: building_setting
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: BuildingSettingEnum
    required: true
  light_type:
    name: light_type
    description: Application of light to achieve some practical or aesthetic effect.
      Lighting includes the use of both artificial light sources such as lamps and
      light fixtures, as well as natural illumination by capturing daylight. Can also
      include absence of light
    title: light type
    examples:
    - value: desk lamp
    from_schema: https://w3id.org/mixs
    keywords:
    - light
    - type
    slot_uri: MIXS:0000769
    alias: light_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: LightTypeEnum
    required: true
    multivalued: true
  samp_sort_meth:
    name: samp_sort_meth
    description: Method by which samples are sorted; open face filter collecting total
      suspended particles, prefilter to remove particles larger than X micrometers
      in diameter, where common values of X would be 10 and 2.5 full size sorting
      in a cascade impactor
    title: sample size sorting method
    from_schema: https://w3id.org/mixs
    keywords:
    - method
    - sample
    - size
    slot_uri: MIXS:0000216
    alias: samp_sort_meth
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    multivalued: true
  space_typ_state:
    name: space_typ_state
    description: Customary or normal state of the space
    title: space typical state
    examples:
    - value: typically occupied
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000770
    alias: space_typ_state
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SpaceTypStateEnum
    required: true
  typ_occup_density:
    name: typ_occup_density
    description: Customary or normal density of occupants
    title: typical occupant density
    examples:
    - value: '25'
    from_schema: https://w3id.org/mixs
    keywords:
    - density
    slot_uri: MIXS:0000771
    alias: typ_occup_density
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    required: true
  occup_samp:
    name: occup_samp
    description: Number of occupants present at time of sample within the given space
    title: occupancy at sampling
    examples:
    - value: '10'
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000772
    alias: occup_samp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    required: true
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  occup_density_samp:
    name: occup_density_samp
    description: Average number of occupants at time of sampling per square footage
    title: occupant density at sampling
    examples:
    - value: '0.1'
    from_schema: https://w3id.org/mixs
    keywords:
    - density
    slot_uri: MIXS:0000217
    alias: occup_density_samp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: float
    required: true
  address:
    name: address
    description: The street name and building number where the sampling occurred
    title: address
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000218
    alias: address
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    structured_pattern:
      syntax: ^{integer} {text}}$
      interpolated: true
      partial_match: true
  adj_room:
    name: adj_room
    description: List of rooms (room number, room name) immediately adjacent to the
      sampling room
    title: adjacent rooms
    from_schema: https://w3id.org/mixs
    keywords:
    - adjacent
    - room
    slot_uri: MIXS:0000219
    alias: adj_room
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
    structured_pattern:
      syntax: ^{room_name};{room_number}$
      interpolated: true
      partial_match: true
  aero_struc:
    name: aero_struc
    description: Aerospace structures typically consist of thin plates with stiffeners
      for the external surfaces, bulkheads and frames to support the shape and fasteners
      such as welds, rivets, screws and bolts to hold the components together
    title: aerospace structure
    examples:
    - value: plane
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000773
    alias: aero_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: AeroStrucEnum
  amount_light:
    name: amount_light
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: lux, lumens per square meter
    description: The unit of illuminance and luminous emittance, measuring luminous
      flux per unit area
    title: amount of light
    from_schema: https://w3id.org/mixs
    keywords:
    - light
    slot_uri: MIXS:0000140
    alias: amount_light
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  arch_struc:
    name: arch_struc
    description: An architectural structure is a human-made, free-standing, immobile
      outdoor construction
    title: architectural structure
    examples:
    - value: shed
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000774
    alias: arch_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: ArchStrucEnum
  avg_occup:
    name: avg_occup
    description: Daily average occupancy of room. Indicate the number of person(s)
      daily occupying the sampling room
    title: average daily occupancy
    examples:
    - value: '2'
    from_schema: https://w3id.org/mixs
    keywords:
    - average
    slot_uri: MIXS:0000775
    alias: avg_occup
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: float
  avg_dew_point:
    name: avg_dew_point
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: The average of dew point measures taken at the beginning of every
      hour over a 24 hour period on the sampling day
    title: average dew point
    examples:
    - value: 25.5 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - average
    slot_uri: MIXS:0000141
    alias: avg_dew_point
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  avg_temp:
    name: avg_temp
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: The average of temperatures taken at the beginning of every hour
      over a 24 hour period on the sampling day
    title: average temperature
    examples:
    - value: 12.5 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - average
    - temperature
    slot_uri: MIXS:0000142
    alias: avg_temp
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  bathroom_count:
    name: bathroom_count
    description: The number of bathrooms in the building
    title: bathroom count
    examples:
    - value: '1'
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    slot_uri: MIXS:0000776
    alias: bathroom_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  bedroom_count:
    name: bedroom_count
    description: The number of bedrooms in the building
    title: bedroom count
    examples:
    - value: '2'
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    slot_uri: MIXS:0000777
    alias: bedroom_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  built_struc_age:
    name: built_struc_age
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: year
    description: The age of the built structure since construction
    title: built structure age
    examples:
    - value: 15 years
    from_schema: https://w3id.org/mixs
    keywords:
    - age
    slot_uri: MIXS:0000145
    alias: built_struc_age
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  built_struc_set:
    name: built_struc_set
    description: The characterization of the location of the built structure as high
      or low human density
    title: built structure setting
    examples:
    - value: rural
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000778
    alias: built_struc_set
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: BuiltStrucSetEnum
  built_struc_type:
    name: built_struc_type
    description: A physical structure that is a body or assemblage of bodies in space
      to form a system capable of supporting loads
    title: built structure type
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000721
    alias: built_struc_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  ceil_area:
    name: ceil_area
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The area of the ceiling space within the room
    title: ceiling area
    examples:
    - value: 25 square meter
    from_schema: https://w3id.org/mixs
    keywords:
    - area
    - ceiling
    slot_uri: MIXS:0000148
    alias: ceil_area
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  ceil_cond:
    name: ceil_cond
    description: The physical condition of the ceiling at the time of sampling; photos
      or video preferred; use drawings to indicate location of damaged areas
    title: ceiling condition
    examples:
    - value: damaged
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    - condition
    slot_uri: MIXS:0000779
    alias: ceil_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedEnum
  ceil_finish_mat:
    name: ceil_finish_mat
    description: The type of material used to finish a ceiling
    title: ceiling finish material
    examples:
    - value: stucco
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    - material
    slot_uri: MIXS:0000780
    alias: ceil_finish_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CeilFinishMatEnum
  ceil_water_mold:
    name: ceil_water_mold
    description: Signs of the presence of mold or mildew on the ceiling
    title: ceiling signs of water/mold
    examples:
    - value: presence of mold visible
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    slot_uri: MIXS:0000781
    alias: ceil_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MoldVisibilityEnum
  ceil_struc:
    name: ceil_struc
    description: The construction format of the ceiling
    title: ceiling structure
    examples:
    - value: concrete
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    slot_uri: MIXS:0000782
    alias: ceil_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CeilStrucEnum
  ceil_texture:
    name: ceil_texture
    description: The feel, appearance, or consistency of a ceiling surface
    title: ceiling texture
    examples:
    - value: popcorn
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    - texture
    slot_uri: MIXS:0000783
    alias: ceil_texture
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CeilingWallTextureEnum
  ceil_thermal_mass:
    name: ceil_thermal_mass
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: joule per degree Celsius
    description: The ability of the ceiling to provide inertia against temperature
      fluctuations. Generally this means concrete that is exposed. A metal deck that
      supports a concrete slab will act thermally as long as it is exposed to room
      air flow
    title: ceiling thermal mass
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    - mass
    slot_uri: MIXS:0000143
    alias: ceil_thermal_mass
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  ceil_type:
    name: ceil_type
    description: The type of ceiling according to the ceiling's appearance or construction
    title: ceiling type
    examples:
    - value: coffered
    from_schema: https://w3id.org/mixs
    keywords:
    - ceiling
    - type
    slot_uri: MIXS:0000784
    alias: ceil_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CeilTypeEnum
  cool_syst_id:
    name: cool_syst_id
    description: The cooling system identifier
    title: cooling system identifier
    examples:
    - value: '12345'
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    slot_uri: MIXS:0000785
    alias: cool_syst_id
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  date_last_rain:
    name: date_last_rain
    description: The date of the last time it rained
    title: date last rain
    examples:
    - value: '2013-03-25T12:42:31+01:00'
    from_schema: https://w3id.org/mixs
    keywords:
    - date
    - rain
    slot_uri: MIXS:0000786
    alias: date_last_rain
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: datetime
  build_docs:
    name: build_docs
    description: The building design, construction and operation documents
    title: design, construction, and operation documents
    examples:
    - value: maintenance plans
    from_schema: https://w3id.org/mixs
    keywords:
    - documents
    slot_uri: MIXS:0000787
    alias: build_docs
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: BuildDocsEnum
  door_size:
    name: door_size
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The size of the door
    title: door area or size
    examples:
    - value: 2.5 square meter
    from_schema: https://w3id.org/mixs
    keywords:
    - area
    - door
    - size
    slot_uri: MIXS:0000158
    alias: door_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  door_cond:
    name: door_cond
    description: The phsical condition of the door
    title: door condition
    examples:
    - value: new
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - door
    slot_uri: MIXS:0000788
    alias: door_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedRupturedEnum
  door_direct:
    name: door_direct
    description: The direction the door opens
    title: door direction of opening
    examples:
    - value: inward
    from_schema: https://w3id.org/mixs
    keywords:
    - direction
    - door
    slot_uri: MIXS:0000789
    alias: door_direct
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorDirectEnum
  door_loc:
    name: door_loc
    description: The relative location of the door in the room
    title: door location
    examples:
    - value: north
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - location
    slot_uri: MIXS:0000790
    alias: door_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  door_mat:
    name: door_mat
    description: The material the door is composed of
    title: door material
    examples:
    - value: wood
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - material
    slot_uri: MIXS:0000791
    alias: door_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorMatEnum
  door_move:
    name: door_move
    description: The type of movement of the door
    title: door movement
    examples:
    - value: swinging
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    slot_uri: MIXS:0000792
    alias: door_move
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorMoveEnum
  door_water_mold:
    name: door_water_mold
    description: Signs of the presence of mold or mildew on a door
    title: door signs of water/mold
    examples:
    - value: presence of mold visible
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    slot_uri: MIXS:0000793
    alias: door_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MoldVisibilityEnum
  door_type:
    name: door_type
    description: The type of door material
    title: door type
    examples:
    - value: wooden
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - type
    slot_uri: MIXS:0000794
    alias: door_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorTypeEnum
  door_comp_type:
    name: door_comp_type
    description: The composite type of the door
    title: door type, composite
    examples:
    - value: revolving
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - type
    slot_uri: MIXS:0000795
    alias: door_comp_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorCompTypeEnum
  door_type_metal:
    name: door_type_metal
    description: The type of metal door
    title: door type, metal
    examples:
    - value: hollow
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - type
    slot_uri: MIXS:0000796
    alias: door_type_metal
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DoorTypeMetalEnum
  door_type_wood:
    name: door_type_wood
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: The type of wood door
    title: door type, wood
    examples:
    - value: battened
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - type
    string_serialization: '[bettened and ledged|battened|ledged and braced|battened|ledged
      and framed|battened|ledged, braced and frame|framed and paneled|glashed or sash|flush|louvered|wire
      gauged]'
    slot_uri: MIXS:0000797
    alias: door_type_wood
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  drawings:
    name: drawings
    description: The buildings architectural drawings; if design is chosen, indicate
      phase-conceptual, schematic, design development, and construction documents
    title: drawings
    examples:
    - value: sketch
    from_schema: https://w3id.org/mixs
    keywords:
    - drawings
    slot_uri: MIXS:0000798
    alias: drawings
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DrawingsEnum
  elevator:
    name: elevator
    description: The number of elevators within the built structure
    title: elevator count
    examples:
    - value: '2'
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    slot_uri: MIXS:0000799
    alias: elevator
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  escalator:
    name: escalator
    description: The number of escalators within the built structure
    title: escalator count
    examples:
    - value: '4'
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    slot_uri: MIXS:0000800
    alias: escalator
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  exp_duct:
    name: exp_duct
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The amount of exposed ductwork in the room
    title: exposed ductwork
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000144
    alias: exp_duct
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  exp_pipe:
    name: exp_pipe
    description: The number of exposed pipes in the room
    title: exposed pipes
    from_schema: https://w3id.org/mixs
    keywords:
    - pipes
    slot_uri: MIXS:0000220
    alias: exp_pipe
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  ext_door:
    name: ext_door
    description: The number of exterior doors in the built structure
    title: exterior door count
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - door
    - exterior
    slot_uri: MIXS:0000170
    alias: ext_door
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  fireplace_type:
    name: fireplace_type
    description: A firebox with chimney
    title: fireplace type
    examples:
    - value: wood burning
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    slot_uri: MIXS:0000802
    alias: fireplace_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: FireplaceTypeEnum
  floor_age:
    name: floor_age
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: years, weeks, days
    description: The time period since installment of the carpet or flooring
    title: floor age
    from_schema: https://w3id.org/mixs
    keywords:
    - age
    - floor
    slot_uri: MIXS:0000164
    alias: floor_age
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  floor_area:
    name: floor_area
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The area of the floor space within the room
    title: floor area
    from_schema: https://w3id.org/mixs
    keywords:
    - area
    - floor
    slot_uri: MIXS:0000165
    alias: floor_area
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  floor_cond:
    name: floor_cond
    description: The physical condition of the floor at the time of sampling; photos
      or video preferred; use drawings to indicate location of damaged areas
    title: floor condition
    examples:
    - value: new
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - floor
    slot_uri: MIXS:0000803
    alias: floor_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedEnum
  floor_count:
    name: floor_count
    description: The number of floors in the building, including basements and mechanical
      penthouse
    title: floor count
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - floor
    slot_uri: MIXS:0000225
    alias: floor_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  floor_finish_mat:
    name: floor_finish_mat
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: The floor covering type; the finished surface that is walked on
    title: floor finish material
    examples:
    - value: carpet
    from_schema: https://w3id.org/mixs
    keywords:
    - floor
    - material
    string_serialization: '[tile|wood strip or parquet|carpet|rug|laminate wood|lineoleum|vinyl
      composition tile|sheet vinyl|stone|bamboo|cork|terrazo|concrete|none;specify
      unfinished|sealed|clear finish|paint]'
    slot_uri: MIXS:0000804
    alias: floor_finish_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  floor_water_mold:
    name: floor_water_mold
    description: Signs of the presence of mold or mildew in a room
    title: floor signs of water/mold
    examples:
    - value: ceiling discoloration
    from_schema: https://w3id.org/mixs
    keywords:
    - floor
    slot_uri: MIXS:0000805
    alias: floor_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: FloorWaterMoldEnum
  floor_struc:
    name: floor_struc
    description: Refers to the structural elements and subfloor upon which the finish
      flooring is installed
    title: floor structure
    examples:
    - value: concrete
    from_schema: https://w3id.org/mixs
    keywords:
    - floor
    slot_uri: MIXS:0000806
    alias: floor_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: FloorStrucEnum
  floor_thermal_mass:
    name: floor_thermal_mass
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: joule per degree Celsius
    description: The ability of the floor to provide inertia against temperature fluctuations
    title: floor thermal mass
    from_schema: https://w3id.org/mixs
    keywords:
    - floor
    - mass
    slot_uri: MIXS:0000166
    alias: floor_thermal_mass
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  freq_clean:
    name: freq_clean
    description: The number of times the sample location is cleaned. Frequency of
      cleaning might be on a Daily basis, Weekly, Monthly, Quarterly or Annually
    title: frequency of cleaning
    examples:
    - value: Daily
    from_schema: https://w3id.org/mixs
    keywords:
    - frequency
    string_serialization: '[ Daily| Weekly| Monthly| Quarterly | Annually| other]'
    slot_uri: MIXS:0000226
    alias: freq_clean
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: FreqCleanEnum
  freq_cook:
    name: freq_cook
    description: The number of times a meal is cooked per week
    title: frequency of cooking
    from_schema: https://w3id.org/mixs
    keywords:
    - frequency
    slot_uri: MIXS:0000227
    alias: freq_cook
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  furniture:
    name: furniture
    description: The types of furniture present in the sampled room
    title: furniture
    examples:
    - value: chair
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000807
    alias: furniture
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: FurnitureEnum
  gender_restroom:
    name: gender_restroom
    description: The gender type of the restroom
    title: gender of restroom
    examples:
    - value: male
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000808
    alias: gender_restroom
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: GenderRestroomEnum
  hall_count:
    name: hall_count
    description: The total count of hallways and cooridors in the built structure
    title: hallway/corridor count
    from_schema: https://w3id.org/mixs
    keywords:
    - corridor
    - count
    - hallway
    slot_uri: MIXS:0000228
    alias: hall_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  handidness:
    name: handidness
    description: The handidness of the individual sampled
    title: handidness
    examples:
    - value: right handedness
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000809
    alias: handidness
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: HandidnessEnum
  heat_deliv_loc:
    name: heat_deliv_loc
    description: The location of heat delivery within the room
    title: heating delivery locations
    examples:
    - value: north
    from_schema: https://w3id.org/mixs
    keywords:
    - delivery
    - location
    - locations
    slot_uri: MIXS:0000810
    alias: heat_deliv_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  heat_sys_deliv_meth:
    name: heat_sys_deliv_meth
    description: The method by which the heat is delivered through the system
    title: heating system delivery method
    examples:
    - value: radiant
    from_schema: https://w3id.org/mixs
    keywords:
    - delivery
    - method
    slot_uri: MIXS:0000812
    alias: heat_sys_deliv_meth
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: HeatSysDelivMethEnum
  heat_system_id:
    name: heat_system_id
    description: The heating system identifier
    title: heating system identifier
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    slot_uri: MIXS:0000833
    alias: heat_system_id
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  height_carper_fiber:
    name: height_carper_fiber
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: centimeter
    description: The average carpet fiber height in the indoor environment
    title: height carpet fiber mat
    from_schema: https://w3id.org/mixs
    keywords:
    - height
    slot_uri: MIXS:0000167
    alias: height_carper_fiber
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  inside_lux:
    name: inside_lux
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: kilowatt per square metre
    description: The recorded value at sampling time (power density)
    title: inside lux light
    from_schema: https://w3id.org/mixs
    keywords:
    - inside
    - light
    slot_uri: MIXS:0000168
    alias: inside_lux
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  int_wall_cond:
    name: int_wall_cond
    description: The physical condition of the wall at the time of sampling; photos
      or video preferred; use drawings to indicate location of damaged areas
    title: interior wall condition
    examples:
    - value: damaged
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - interior
    - wall
    slot_uri: MIXS:0000813
    alias: int_wall_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedEnum
  last_clean:
    name: last_clean
    description: The last time the floor was cleaned (swept, mopped, vacuumed)
    title: last time swept/mopped/vacuumed
    examples:
    - value: '2013-03-25T12:42:31+01:00'
    from_schema: https://w3id.org/mixs
    keywords:
    - time
    slot_uri: MIXS:0000814
    alias: last_clean
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: datetime
  max_occup:
    name: max_occup
    description: The maximum amount of people allowed in the indoor environment
    title: maximum occupancy
    from_schema: https://w3id.org/mixs
    keywords:
    - maximum
    slot_uri: MIXS:0000229
    alias: max_occup
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  mech_struc:
    name: mech_struc
    description: 'mechanical structure: a moving structure'
    title: mechanical structure
    examples:
    - value: elevator
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000815
    alias: mech_struc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MechStrucEnum
  number_plants:
    name: number_plants
    description: The number of plant(s) in the sampling space
    title: number of houseplants
    from_schema: https://w3id.org/mixs
    keywords:
    - number
    slot_uri: MIXS:0000230
    alias: number_plants
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  number_pets:
    name: number_pets
    description: The number of pets residing in the sampled space
    title: number of pets
    from_schema: https://w3id.org/mixs
    keywords:
    - number
    slot_uri: MIXS:0000231
    alias: number_pets
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  number_resident:
    name: number_resident
    description: The number of individuals currently occupying in the sampling location
    title: number of residents
    from_schema: https://w3id.org/mixs
    keywords:
    - number
    slot_uri: MIXS:0000232
    alias: number_resident
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  occup_document:
    name: occup_document
    description: The type of documentation of occupancy
    title: occupancy documentation
    examples:
    - value: estimate
    from_schema: https://w3id.org/mixs
    keywords:
    - documentation
    slot_uri: MIXS:0000816
    alias: occup_document
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: OccupDocumentEnum
  ext_wall_orient:
    name: ext_wall_orient
    description: The orientation of the exterior wall
    title: orientations of exterior wall
    examples:
    - value: northwest
    from_schema: https://w3id.org/mixs
    keywords:
    - exterior
    - wall
    slot_uri: MIXS:0000817
    alias: ext_wall_orient
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  ext_window_orient:
    name: ext_window_orient
    description: The compass direction the exterior window of the room is facing
    title: orientations of exterior window
    examples:
    - value: southwest
    from_schema: https://w3id.org/mixs
    keywords:
    - exterior
    - window
    slot_uri: MIXS:0000818
    alias: ext_window_orient
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  rel_humidity_out:
    name: rel_humidity_out
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: gram of air, kilogram of air
    description: The recorded outside relative humidity value at the time of sampling
    title: outside relative humidity
    examples:
    - value: 12 per kilogram of air
    from_schema: https://w3id.org/mixs
    keywords:
    - humidity
    - relative
    slot_uri: MIXS:0000188
    alias: rel_humidity_out
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  pres_animal_insect:
    name: pres_animal_insect
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration;count
    description: The type and number of animals or insects present in the sampling
      space
    title: presence of pets, animals, or insects
    examples:
    - value: cat;5
    from_schema: https://w3id.org/mixs
    keywords:
    - animal
    - presence
    string_serialization: '[cat|dog|rodent|snake|other];{integer}'
    slot_uri: MIXS:0000819
    alias: pres_animal_insect
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Agriculture
    - BuiltEnvironment
    range: string
  quad_pos:
    name: quad_pos
    description: The quadrant position of the sampling room within the building
    title: quadrant position
    examples:
    - value: West side
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000820
    alias: quad_pos
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: QuadPosEnum
  rel_samp_loc:
    name: rel_samp_loc
    description: The sampling location within the train car
    title: relative sampling location
    examples:
    - value: center of car
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - relative
    slot_uri: MIXS:0000821
    alias: rel_samp_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: RelSampLocEnum
  room_air_exch_rate:
    name: room_air_exch_rate
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: liter per hour
    description: The rate at which outside air replaces indoor air in a given space
    title: room air exchange rate
    from_schema: https://w3id.org/mixs
    keywords:
    - air
    - rate
    - room
    slot_uri: MIXS:0000169
    alias: room_air_exch_rate
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  room_architec_elem:
    name: room_architec_elem
    description: The unique details and component parts that, together, form the architecture
      of a distinguisahable space within a built structure
    title: room architectural elements
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    slot_uri: MIXS:0000233
    alias: room_architec_elem
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  room_condt:
    name: room_condt
    description: The condition of the room at the time of sampling
    title: room condition
    examples:
    - value: new
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - room
    slot_uri: MIXS:0000822
    alias: room_condt
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: RoomCondtEnum
  room_count:
    name: room_count
    description: The total count of rooms in the built structure including all room
      types
    title: room count
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - room
    slot_uri: MIXS:0000234
    alias: room_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  room_dim:
    name: room_dim
    annotations:
      Expected_value:
        tag: Expected_value
        value: measurement value
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: The length, width and height of sampling room
    title: room dimensions
    examples:
    - value: 4 meter x 4 meter x 4 meter
    from_schema: https://w3id.org/mixs
    keywords:
    - dimensions
    - room
    string_serialization: '{integer} {unit} x {integer} {unit} x {integer} {unit}'
    slot_uri: MIXS:0000192
    alias: room_dim
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: string
  room_door_dist:
    name: room_door_dist
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: meter
    description: Distance between doors (meters) in the hallway between the sampling
      room and adjacent rooms
    title: room door distance
    from_schema: https://w3id.org/mixs
    keywords:
    - distance
    - door
    - room
    slot_uri: MIXS:0000193
    alias: room_door_dist
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  room_loc:
    name: room_loc
    description: The position of the room within the building
    title: room location in building
    examples:
    - value: interior room
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - room
    slot_uri: MIXS:0000823
    alias: room_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: RoomLocEnum
  room_moist_dam_hist:
    name: room_moist_dam_hist
    description: The history of moisture damage or mold in the past 12 months. Number
      of events of moisture damage or mold observed
    title: room moisture damage or mold history
    from_schema: https://w3id.org/mixs
    keywords:
    - history
    - moisture
    - room
    slot_uri: MIXS:0000235
    alias: room_moist_dam_hist
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  room_net_area:
    name: room_net_area
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square feet, square meter
    description: The net floor area of sampling room. Net area excludes wall thicknesses
    title: room net area
    from_schema: https://w3id.org/mixs
    keywords:
    - area
    - room
    slot_uri: MIXS:0000194
    alias: room_net_area
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  room_occup:
    name: room_occup
    description: Count of room occupancy at time of sampling
    title: room occupancy
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    slot_uri: MIXS:0000236
    alias: room_occup
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  room_samp_pos:
    name: room_samp_pos
    description: The horizontal sampling position in the room relative to architectural
      elements
    title: room sampling position
    examples:
    - value: south corner
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    slot_uri: MIXS:0000824
    alias: room_samp_pos
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: RoomSampPosEnum
  room_type:
    name: room_type
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: The main purpose or activity of the sampling room. A room is any
      distinguishable space within a structure
    title: room type
    examples:
    - value: bathroom
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    - type
    string_serialization: '[attic|bathroom|closet|conference room|elevator|examining
      room|hallway|kitchen|mail room|private office|open office|stairwell|,restroom|lobby|vestibule|mechanical
      or electrical room|data center|laboratory_wet|laboratory_dry|gymnasium|natatorium|auditorium|lockers|cafe|warehouse]'
    slot_uri: MIXS:0000825
    alias: room_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  room_vol:
    name: room_vol
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: cubic feet, cubic meter
    description: Volume of sampling room
    title: room volume
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    - volume
    slot_uri: MIXS:0000195
    alias: room_vol
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{integer} {text}$
      interpolated: true
      partial_match: true
  room_window_count:
    name: room_window_count
    description: Number of windows in the room
    title: room window count
    from_schema: https://w3id.org/mixs
    keywords:
    - count
    - room
    - window
    slot_uri: MIXS:0000237
    alias: room_window_count
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  room_connected:
    name: room_connected
    description: List of rooms connected to the sampling room by a doorway
    title: rooms connected by a doorway
    examples:
    - value: office
    from_schema: https://w3id.org/mixs
    keywords:
    - doorway
    - room
    slot_uri: MIXS:0000826
    alias: room_connected
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: RoomConnectedEnum
  room_hallway:
    name: room_hallway
    description: List of room(s) (room number, room name) located in the same hallway
      as sampling room
    title: rooms that are on the same hallway
    from_schema: https://w3id.org/mixs
    keywords:
    - hallway
    - room
    slot_uri: MIXS:0000238
    alias: room_hallway
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
    structured_pattern:
      syntax: ^{room_name};{room_number}$
      interpolated: true
      partial_match: true
  room_door_share:
    name: room_door_share
    description: List of room(s) (room number, room name) sharing a door with the
      sampling room
    title: rooms that share a door with sampling room
    from_schema: https://w3id.org/mixs
    keywords:
    - door
    - room
    slot_uri: MIXS:0000242
    alias: room_door_share
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
    structured_pattern:
      syntax: ^{room_name};{room_number}$
      interpolated: true
      partial_match: true
  room_wall_share:
    name: room_wall_share
    description: List of room(s) (room number, room name) sharing a wall with the
      sampling room
    title: rooms that share a wall with sampling room
    from_schema: https://w3id.org/mixs
    keywords:
    - room
    - wall
    slot_uri: MIXS:0000243
    alias: room_wall_share
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
    structured_pattern:
      syntax: ^{room_name};{room_number}$
      interpolated: true
      partial_match: true
  samp_weather:
    name: samp_weather
    description: The weather on the sampling day
    title: sampling day weather
    examples:
    - value: foggy
    from_schema: https://w3id.org/mixs
    keywords:
    - day
    - weather
    slot_uri: MIXS:0000827
    alias: samp_weather
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SampWeatherEnum
  samp_floor:
    name: samp_floor
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: The floor of the building, where the sampling room is located
    title: sampling floor
    examples:
    - value: 4th floor
    from_schema: https://w3id.org/mixs
    keywords:
    - floor
    string_serialization: '[1st floor|2nd floor|{integer} floor|basement|lobby]'
    slot_uri: MIXS:0000828
    alias: samp_floor
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: string
  samp_room_id:
    name: samp_room_id
    description: Sampling room number. This ID should be consistent with the designations
      on the building floor plans
    title: sampling room ID or name
    from_schema: https://w3id.org/mixs
    keywords:
    - identifier
    - room
    slot_uri: MIXS:0000244
    alias: samp_room_id
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    - FoodFoodProductionFacility
    range: integer
  samp_time_out:
    name: samp_time_out
    annotations:
      Expected_value:
        tag: Expected_value
        value: time
      Preferred_unit:
        tag: Preferred_unit
        value: hour
    description: The recent and long term history of outside sampling
    title: sampling time outside
    from_schema: https://w3id.org/mixs
    keywords:
    - time
    string_serialization: '{float}'
    slot_uri: MIXS:0000196
    alias: samp_time_out
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  season:
    name: season
    annotations:
      Expected_value:
        tag: Expected_value
        value: autumn [NCIT:C94733], spring [NCIT:C94731], summer [NCIT:C94732], winter
          [NCIT:C94730]
    description: The season when sampling occurred. Any of the four periods into which
      the year is divided by the equinoxes and solstices. This field accepts terms
      listed under season (http://purl.obolibrary.org/obo/NCIT_C94729)
    title: season
    comments:
    - autumn [NCIT:C94733] does not match ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:\\d+\\]$
    - would require ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:[a-zA-Z0-9]\\]$
    examples:
    - value: autumn [NCIT:C94733]
    from_schema: https://w3id.org/mixs
    keywords:
    - season
    string_serialization: '{termLabel} [{termID}]'
    slot_uri: MIXS:0000829
    alias: season
    owner: MiuvigBuiltEnvironment
    domain_of:
    - Agriculture
    - BuiltEnvironment
    - FoodFarmEnvironment
    range: string
    pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:[a-zA-Z0-9]+\]$
  season_use:
    name: season_use
    description: The seasons the space is occupied
    title: seasonal use
    examples:
    - value: Winter
    from_schema: https://w3id.org/mixs
    keywords:
    - season
    - use
    slot_uri: MIXS:0000830
    alias: season_use
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SeasonUseEnum
  shading_device_cond:
    name: shading_device_cond
    description: The physical condition of the shading device at the time of sampling
    title: shading device condition
    examples:
    - value: new
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - device
    slot_uri: MIXS:0000831
    alias: shading_device_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedRupturedEnum
  shading_device_loc:
    name: shading_device_loc
    description: The location of the shading device in relation to the built structure
    title: shading device location
    examples:
    - value: exterior
    from_schema: https://w3id.org/mixs
    keywords:
    - device
    - location
    slot_uri: MIXS:0000832
    alias: shading_device_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: ShadingDeviceLocEnum
  shading_device_mat:
    name: shading_device_mat
    annotations:
      Expected_value:
        tag: Expected_value
        value: material name
    description: The material the shading device is composed of
    title: shading device material
    from_schema: https://w3id.org/mixs
    keywords:
    - device
    - material
    slot_uri: MIXS:0000245
    alias: shading_device_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  shad_dev_water_mold:
    name: shad_dev_water_mold
    description: Signs of the presence of mold or mildew on the shading device
    title: shading device signs of water/mold
    examples:
    - value: no presence of mold visible
    from_schema: https://w3id.org/mixs
    keywords:
    - device
    slot_uri: MIXS:0000834
    alias: shad_dev_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MoldVisibilityEnum
  shading_device_type:
    name: shading_device_type
    description: The type of shading device
    title: shading device type
    examples:
    - value: slatted aluminum
      description: was slatted aluminum awning
    from_schema: https://w3id.org/mixs
    keywords:
    - device
    - type
    slot_uri: MIXS:0000835
    alias: shading_device_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: ShadingDeviceTypeEnum
  specific_humidity:
    name: specific_humidity
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: gram of air, kilogram of air
    description: The mass of water vapour in a unit mass of moist air, usually expressed
      as grams of vapour per kilogram of air, or, in air conditioning, as grains per
      pound
    title: specific humidity
    examples:
    - value: 15 per kilogram of air
    from_schema: https://w3id.org/mixs
    keywords:
    - humidity
    slot_uri: MIXS:0000214
    alias: specific_humidity
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  specific:
    name: specific
    description: 'The building specifications. If design is chosen, indicate phase:
      conceptual, schematic, design development, construction documents'
    title: specifications
    examples:
    - value: construction
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000836
    alias: specific
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: SpecificEnum
  temp_out:
    name: temp_out
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: degree Celsius
    description: The recorded temperature value at sampling time outside
    title: temperature outside house
    examples:
    - value: 5 degree Celsius
    from_schema: https://w3id.org/mixs
    keywords:
    - house
    - temperature
    slot_uri: MIXS:0000197
    alias: temp_out
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  train_line:
    name: train_line
    description: The subway line name
    title: train line
    examples:
    - value: red
    from_schema: https://w3id.org/mixs
    keywords:
    - train
    slot_uri: MIXS:0000837
    alias: train_line
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: TrainLineEnum
  train_stat_loc:
    name: train_stat_loc
    description: The train station collection location
    title: train station collection location
    examples:
    - value: forest hills
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - train
    slot_uri: MIXS:0000838
    alias: train_stat_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: TrainStatLocEnum
  train_stop_loc:
    name: train_stop_loc
    description: The train stop collection location
    title: train stop collection location
    examples:
    - value: end
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - stop
    - train
    slot_uri: MIXS:0000839
    alias: train_stop_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: TrainStopLocEnum
  vis_media:
    name: vis_media
    annotations:
      Expected_value:
        tag: Expected_value
        value: enumeration
    description: The building visual media
    title: visual media
    examples:
    - value: 3D scans
    from_schema: https://w3id.org/mixs
    string_serialization: '[photos|videos|commonly of the building|site context (adjacent
      buildings, vegetation, terrain, streets)|interiors|equipment|3D scans]'
    slot_uri: MIXS:0000840
    alias: vis_media
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  wall_area:
    name: wall_area
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The total area of the sampled room's walls
    title: wall area
    from_schema: https://w3id.org/mixs
    keywords:
    - area
    - wall
    slot_uri: MIXS:0000198
    alias: wall_area
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  wall_const_type:
    name: wall_const_type
    description: The building class of the wall defined by the composition of the
      building elements and fire-resistance rating
    title: wall construction type
    examples:
    - value: fire resistive
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    - wall
    slot_uri: MIXS:0000841
    alias: wall_const_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WallConstTypeEnum
  wall_finish_mat:
    name: wall_finish_mat
    description: The material utilized to finish the outer most layer of the wall
    title: wall finish material
    examples:
    - value: wood
    from_schema: https://w3id.org/mixs
    keywords:
    - material
    - wall
    slot_uri: MIXS:0000842
    alias: wall_finish_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WallFinishMatEnum
  wall_height:
    name: wall_height
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: centimeter
    description: The average height of the walls in the sampled room
    title: wall height
    from_schema: https://w3id.org/mixs
    keywords:
    - height
    - wall
    slot_uri: MIXS:0000221
    alias: wall_height
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  wall_loc:
    name: wall_loc
    description: The relative location of the wall within the room
    title: wall location
    examples:
    - value: north
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - wall
    slot_uri: MIXS:0000843
    alias: wall_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  wall_water_mold:
    name: wall_water_mold
    description: Signs of the presence of mold or mildew on a wall
    title: wall signs of water/mold
    examples:
    - value: no presence of mold visible
    from_schema: https://w3id.org/mixs
    keywords:
    - wall
    slot_uri: MIXS:0000844
    alias: wall_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MoldVisibilityEnum
  wall_surf_treatment:
    name: wall_surf_treatment
    description: The surface treatment of interior wall
    title: wall surface treatment
    examples:
    - value: paneling
    from_schema: https://w3id.org/mixs
    keywords:
    - surface
    - treatment
    - wall
    slot_uri: MIXS:0000845
    alias: wall_surf_treatment
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WallSurfTreatmentEnum
  wall_texture:
    name: wall_texture
    description: The feel, appearance, or consistency of a wall surface
    title: wall texture
    examples:
    - value: popcorn
    from_schema: https://w3id.org/mixs
    keywords:
    - texture
    - wall
    slot_uri: MIXS:0000846
    alias: wall_texture
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CeilingWallTextureEnum
  wall_thermal_mass:
    name: wall_thermal_mass
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: joule per degree Celsius
    description: The ability of the wall to provide inertia against temperature fluctuations.
      Generally this means concrete or concrete block that is either exposed or covered
      only with paint
    title: wall thermal mass
    from_schema: https://w3id.org/mixs
    keywords:
    - mass
    - wall
    slot_uri: MIXS:0000222
    alias: wall_thermal_mass
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  water_feat_size:
    name: water_feat_size
    annotations:
      Preferred_unit:
        tag: Preferred_unit
        value: square meter
    description: The size of the water feature
    title: water feature size
    from_schema: https://w3id.org/mixs
    keywords:
    - feature
    - size
    - water
    slot_uri: MIXS:0000223
    alias: water_feat_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
    pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
      *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
    structured_pattern:
      syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
      interpolated: true
      partial_match: true
  water_feat_type:
    name: water_feat_type
    description: The type of water feature present within the building being sampled
    title: water feature type
    examples:
    - value: stream
    from_schema: https://w3id.org/mixs
    keywords:
    - feature
    - type
    - water
    slot_uri: MIXS:0000847
    alias: water_feat_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WaterFeatTypeEnum
  weekday:
    name: weekday
    description: The day of the week when sampling occurred
    title: weekday
    examples:
    - value: Sunday
    from_schema: https://w3id.org/mixs
    slot_uri: MIXS:0000848
    alias: weekday
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WeekdayEnum
  window_size:
    name: window_size
    annotations:
      Expected_value:
        tag: Expected_value
        value: measurement value
      Preferred_unit:
        tag: Preferred_unit
        value: inch, meter
    description: The window's length and width
    title: window area/size
    from_schema: https://w3id.org/mixs
    keywords:
    - window
    string_serialization: '{float} {unit} x {float} {unit}'
    slot_uri: MIXS:0000224
    alias: window_size
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: string
  window_cond:
    name: window_cond
    description: The physical condition of the window at the time of sampling
    title: window condition
    examples:
    - value: rupture
    from_schema: https://w3id.org/mixs
    keywords:
    - condition
    - window
    slot_uri: MIXS:0000849
    alias: window_cond
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: DamagedRupturedEnum
  window_cover:
    name: window_cover
    description: The type of window covering
    title: window covering
    examples:
    - value: curtains
    from_schema: https://w3id.org/mixs
    keywords:
    - window
    slot_uri: MIXS:0000850
    alias: window_cover
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowCoverEnum
  window_horiz_pos:
    name: window_horiz_pos
    description: The horizontal position of the window on the wall
    title: window horizontal position
    examples:
    - value: middle
    from_schema: https://w3id.org/mixs
    keywords:
    - window
    slot_uri: MIXS:0000851
    alias: window_horiz_pos
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowHorizPosEnum
  window_loc:
    name: window_loc
    description: The relative location of the window within the room
    title: window location
    examples:
    - value: west
    from_schema: https://w3id.org/mixs
    keywords:
    - location
    - window
    slot_uri: MIXS:0000852
    alias: window_loc
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: CompassDirections8Enum
  window_mat:
    name: window_mat
    description: The type of material used to finish a window
    title: window material
    examples:
    - value: wood
    from_schema: https://w3id.org/mixs
    keywords:
    - material
    - window
    slot_uri: MIXS:0000853
    alias: window_mat
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowMatEnum
  window_open_freq:
    name: window_open_freq
    description: The number of times windows are opened per week
    title: window open frequency
    from_schema: https://w3id.org/mixs
    keywords:
    - frequency
    - window
    slot_uri: MIXS:0000246
    alias: window_open_freq
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: integer
  window_water_mold:
    name: window_water_mold
    description: Signs of the presence of mold or mildew on the window
    title: window signs of water/mold
    examples:
    - value: no presence of mold visible
    from_schema: https://w3id.org/mixs
    keywords:
    - window
    slot_uri: MIXS:0000854
    alias: window_water_mold
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: MoldVisibilityEnum
  window_status:
    name: window_status
    description: Defines whether the windows were open or closed during environmental
      testing
    title: window status
    examples:
    - value: open
    from_schema: https://w3id.org/mixs
    keywords:
    - status
    - window
    slot_uri: MIXS:0000855
    alias: window_status
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowStatusEnum
  window_type:
    name: window_type
    description: The type of windows
    title: window type
    examples:
    - value: fixed window
    from_schema: https://w3id.org/mixs
    keywords:
    - type
    - window
    slot_uri: MIXS:0000856
    alias: window_type
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowTypeEnum
  window_vert_pos:
    name: window_vert_pos
    description: The vertical position of the window on the wall
    title: window vertical position
    examples:
    - value: middle
    from_schema: https://w3id.org/mixs
    keywords:
    - window
    slot_uri: MIXS:0000857
    alias: window_vert_pos
    owner: MiuvigBuiltEnvironment
    domain_of:
    - BuiltEnvironment
    range: WindowVertPosEnum
class_uri: MIXS:0010012_0016001