Skip to content

Term: relative amount of nucleic acids in the gradient position (gradient_pos_rel_am)

The total nucleic acids loaded onto the column in this fraction as a decimal. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value should be calculated from qPCR data. If uploading untargetted sequencing data, this value should be calculated from total DNA concentration.

URI: MIXS:0001344

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use gradient_pos_rel_am.

Name Description Checklist/Extension
MimsMisip Metagenome or Environmental with SIP Checklist

Properties

  • Range: Float
  • Cardinality: 0..1 recommended

  • Structured pattern: ^{float}$

Examples

Value
0.1

LinkML Source

name: gradient_pos_rel_am
description: The total nucleic acids loaded onto the column in this fraction as a
  decimal. If uploading 16S rRNA gene (or other amplicon) sequencing data, this value
  should be calculated from qPCR data. If uploading untargetted sequencing data, this
  value should be calculated from total DNA concentration.
title: relative amount of nucleic acids in the gradient position
examples:
- value: '0.1'
from_schema: https://w3id.org/mixs
slot_uri: MIXS:0001344
alias: gradient_pos_rel_am
domain_of:
- MimsMisip
range: float
recommended: true
structured_pattern:
  syntax: ^{float}$