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Term: sample collection method (samp_collect_method)

The method employed for collecting the sample

URI: MIXS:0001225

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use samp_collect_method.

Name Description Checklist/Extension
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MimarksC Minimal Information about a Marker Sequence: specimen Checklist
MigsVi Minimal Information about a Genome Sequence: virus Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
MimsMisip Metagenome or Environmental with SIP Checklist
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
Mims Metagenome or Environmental Checklist

Properties

  • Range: String

  • Cardinality: 0..1

  • Structured pattern: ^({PMID}|{DOI}|{URL}|{text})$

LinkML Source

name: samp_collect_method
description: The method employed for collecting the sample
title: sample collection method
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/mixs
keywords:
- method
- sample
slot_uri: MIXS:0001225
alias: samp_collect_method
domain_of:
- MimsMisip
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFoodProductionFacility
- FoodHumanFoods
range: string
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL}|{text})$
  interpolated: true
  partial_match: true