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Term: bacteria density (bacterial_density)

Number of bacteria in sample, as defined by bacteria density (http://purl.obolibrary.org/obo/GENEPIO_0000043)

URI: MIXS:0001194

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use bacterial_density.

Name Description Checklist/Extension
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodFoodProductionFacility A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension

Properties

  • Range: String

  • Cardinality: 0..1

  • Structured pattern: ^{scientific_float}( *- *{scientific_float})? *{text}$

  • Regex pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)? *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$

Examples

Value
10 colony forming units per gram dry weight

Annotations

  • Preferred_unit: colony forming units per milliliter; colony forming units per gram of dry weight

LinkML Source

name: bacterial_density
annotations:
  Preferred_unit:
    tag: Preferred_unit
    value: colony forming units per milliliter; colony forming units per gram of dry
      weight
description: Number of bacteria in sample, as defined by bacteria density (http://purl.obolibrary.org/obo/GENEPIO_0000043)
title: bacteria density
examples:
- value: 10 colony forming units per gram dry weight
from_schema: https://w3id.org/mixs
keywords:
- density
slot_uri: MIXS:0001194
alias: bacterial_density
domain_of:
- FoodAnimalAndAnimalFeed
- FoodFoodProductionFacility
- FoodHumanFoods
range: string
pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
  *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
  interpolated: true
  partial_match: true