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Term: spike-in microbial strain (spikein_strain)

Taxonomic information about the spike-in organism(s) at the strain level. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250). This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy. Multiple terms can be separated by pipes

URI: MIXS:0001170

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use spikein_strain.

Name Description Checklist/Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension

Properties

  • Range: String
  • Cardinality: *

Examples

Value
169963

Annotations

  • Expected_value: NCIT:C14250 or NCBI taxid or text

LinkML Source

name: spikein_strain
annotations:
  Expected_value:
    tag: Expected_value
    value: NCIT:C14250 or NCBI taxid or text
description: Taxonomic information about the spike-in organism(s) at the strain level.
  This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
  This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy.
  Multiple terms can be separated by pipes
title: spike-in microbial strain
examples:
- value: '169963'
from_schema: https://w3id.org/mixs
keywords:
- microbial
- spike
string_serialization: '{termLabel} [{termID}]|{integer}'
slot_uri: MIXS:0001170
alias: spikein_strain
domain_of:
- Agriculture
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
range: string
multivalued: true