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Term: spike-in growth medium (spikein_growth_med)

A liquid or gel containing nutrients, salts, and other factors formulated to support the growth of microorganisms, cells, or plants (National Cancer Institute Thesaurus). A growth medium is a culture medium which has the disposition to encourage growth of particular bacteria to the exclusion of others in the same growth environment. In this case, list the culture medium used to propagate the spike-in bacteria during preparation of spike-in inoculum. This field accepts terms listed under microbiological culture medium (http://purl.obolibrary.org/obo/MICRO_0000067). If the proper descriptor is not listed please use text to describe the spike in growth media

URI: MIXS:0001169

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use spikein_growth_med.

Name Description Checklist/Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension

Properties

  • Range: String

  • Cardinality: *

  • Structured pattern: ^{text}|({termLabel} \[{termID}\])$

  • Regex pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$

Examples

Value
LB broth [MCO:0000036]

LinkML Source

name: spikein_growth_med
description: A liquid or gel containing nutrients, salts, and other factors formulated
  to support the growth of microorganisms, cells, or plants (National Cancer Institute
  Thesaurus).  A growth medium is a culture medium which has the disposition to encourage
  growth of particular bacteria to the exclusion of others in the same growth environment.  In
  this case, list the culture medium used to propagate the spike-in bacteria during
  preparation of spike-in inoculum. This field accepts terms listed under microbiological
  culture medium (http://purl.obolibrary.org/obo/MICRO_0000067). If the proper descriptor
  is not listed please use text to describe the spike in growth media
title: spike-in growth medium
examples:
- value: LB broth [MCO:0000036]
from_schema: https://w3id.org/mixs
keywords:
- growth
- spike
slot_uri: MIXS:0001169
alias: spikein_growth_med
domain_of:
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
range: string
multivalued: true
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
structured_pattern:
  syntax: ^{text}|({termLabel} \[{termID}\])$
  interpolated: true
  partial_match: true