Term: plant structure (plant_struc)

Name of plant structure the sample was obtained from; for Plant Ontology (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO, e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex of it can be recorded here

URI: MIXS:0001060

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use plant_struc.

Name	Description	Checklist/Extension
PlantAssociated	A collection of terms appropriate when collecting samples and sequencing samp...	Extension
Agriculture	A collection of terms appropriate when sequencing samples obtained in an agri...	Extension

Properties

• Range: String

• Cardinality: 0..1

• Structured pattern: ^{termLabel} \[{termID}\]$

• Regex pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$

Examples

Value
epidermis [PO:0005679]

LinkML Source

name: plant_struc
description: Name of plant structure the sample was obtained from; for Plant Ontology
  (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO,
  e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex
  of it can be recorded here
title: plant structure
examples:
- value: epidermis [PO:0005679]
from_schema: https://w3id.org/mixs
keywords:
- plant
slot_uri: MIXS:0001060
alias: plant_struc
domain_of:
- Agriculture
- PlantAssociated
range: string
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
structured_pattern:
  syntax: ^{termLabel} \[{termID}\]$
  interpolated: true
  partial_match: true