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Term: chemical administration (chem_administration)

List of chemical compounds administered to the host or site where sampling occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple compounds. For chemical entities of biological interest ontology (chebi) (v 163), http://purl.bioontology.org/ontology/chebi

URI: MIXS:0000751

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use chem_administration.

Name Description Checklist/Extension
HostAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanSkin A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
MiscellaneousNaturalOrArtificialEnvironment A collection of generic terms appropriate when collecting and sequencing samp... Extension
Air A collection of terms appropriate when collecting and sequencing samples obta... Extension
HumanGut A collection of terms appropriate when collecting samples and sequencing samp... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
HumanVaginal A collection of terms appropriate when collecting samples and sequencing samp... Extension
PlantAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Sediment A collection of terms appropriate when collecting samples and sequencing samp... Extension
WastewaterSludge A collection of terms appropriate when collecting samples and sequencing samp... Extension
Water A collection of terms appropriate when collecting samples and sequencing wate... Extension
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
SymbiontAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
MicrobialMatBiofilm A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanOral A collection of terms appropriate when collecting samples and sequencing samp... Extension

Properties

  • Range: String
  • Cardinality: *

Examples

Value
agar [CHEBI:2509];2018-05-11T20:00Z

Annotations

  • Expected_value: CHEBI;timestamp

LinkML Source

name: chem_administration
annotations:
  Expected_value:
    tag: Expected_value
    value: CHEBI;timestamp
description: List of chemical compounds administered to the host or site where sampling
  occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple
  compounds. For chemical entities of biological interest ontology (chebi) (v 163),
  http://purl.bioontology.org/ontology/chebi
title: chemical administration
examples:
- value: agar [CHEBI:2509];2018-05-11T20:00Z
from_schema: https://w3id.org/mixs
keywords:
- administration
string_serialization: '{termLabel} [{termID}];{timestamp}'
slot_uri: MIXS:0000751
alias: chem_administration
domain_of:
- Agriculture
- Air
- FoodFarmEnvironment
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
multivalued: true