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Term: temperature (temp)

Temperature of the sample at the time of sampling

URI: MIXS:0000113

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use temp.

Name Description Checklist/Extension
Soil A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsVi Minimal Information about a Genome Sequence: virus Checklist
WastewaterSludge A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
FoodAnimalAndAnimalFeed A collection of terms appropriate when collecting samples and performing sequ... Extension
FoodHumanFoods A collection of terms appropriate when collecting samples and performing sequ... Extension
PlantAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
HostAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanVaginal A collection of terms appropriate when collecting samples and sequencing samp... Extension
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
FoodFarmEnvironment A collection of terms appropriate when collecting samples and performing sequ... Extension
HumanOral A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanGut A collection of terms appropriate when collecting samples and sequencing samp... Extension
Air A collection of terms appropriate when collecting and sequencing samples obta... Extension
HydrocarbonResourcesFluidsSwabs A collection of terms appropriate when collecting samples and sequencing samp... Extension
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
HydrocarbonResourcesCores A collection of terms appropriate when collecting samples and sequencing samp... Extension
MiscellaneousNaturalOrArtificialEnvironment A collection of generic terms appropriate when collecting and sequencing samp... Extension
MicrobialMatBiofilm A collection of terms appropriate when collecting samples and sequencing samp... Extension
Mims Metagenome or Environmental Checklist
SymbiontAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Water A collection of terms appropriate when collecting samples and sequencing wate... Extension
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
HumanSkin A collection of terms appropriate when collecting samples and sequencing samp... Extension
HumanAssociated A collection of terms appropriate when collecting samples and sequencing samp... Extension
Sediment A collection of terms appropriate when collecting samples and sequencing samp... Extension
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
MimarksC Minimal Information about a Marker Sequence: specimen Checklist

Properties

  • Range: String

  • Cardinality: 0..1

  • Structured pattern: ^{scientific_float}( *- *{scientific_float})? *{text}$

  • Regex pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)? *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$

Examples

Value
25 degree Celsius

Annotations

  • Preferred_unit: degree Celsius

LinkML Source

name: temp
annotations:
  Preferred_unit:
    tag: Preferred_unit
    value: degree Celsius
description: Temperature of the sample at the time of sampling
title: temperature
examples:
- value: 25 degree Celsius
in_subset:
- environment
from_schema: https://w3id.org/mixs
keywords:
- temperature
slot_uri: MIXS:0000113
alias: temp
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
- Air
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
- HostAssociated
- HumanAssociated
- HumanGut
- HumanOral
- HumanSkin
- HumanVaginal
- HydrocarbonResourcesCores
- HydrocarbonResourcesFluidsSwabs
- MicrobialMatBiofilm
- MiscellaneousNaturalOrArtificialEnvironment
- PlantAssociated
- Sediment
- Soil
- SymbiontAssociated
- WastewaterSludge
- Water
range: string
pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
  *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
  interpolated: true
  partial_match: true