Term: MAG coverage software (mag_cov_software)
Tool(s) used to determine the genome coverage if coverage is used as a binning parameter in the extraction of genomes from metagenomic datasets
URI: MIXS:0000080
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use mag_cov_software.
| Name | Description | Checklist/Extension |
|---|---|---|
| Mimag | Minimum Information About a Metagenome-Assembled Genome | Checklist |
| Miuvig | Minimum Information About an Uncultivated Virus Genome | Checklist |
Properties
- Range: MagCovSoftwareEnum
- Cardinality: 0..1
Examples
| Value |
|---|
| bbmap |
LinkML Source
name: mag_cov_software
description: Tool(s) used to determine the genome coverage if coverage is used as
a binning parameter in the extraction of genomes from metagenomic datasets
title: MAG coverage software
examples:
- value: bbmap
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- software
slot_uri: MIXS:0000080
alias: mag_cov_software
domain_of:
- Mimag
- Miuvig
range: MagCovSoftwareEnum