Term: binning software (bin_software)

Tool(s) used for the extraction of genomes from metagenomic datasets, where possible include a product ID (PID) of the tool(s) used

URI: MIXS:0000078

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use bin_software.

Name	Description	Checklist/Extension
Mimag	Minimum Information About a Metagenome-Assembled Genome	Checklist
Miuvig	Minimum Information About an Uncultivated Virus Genome	Checklist

Properties

• Range: String
• Cardinality: 0..1

Examples

Value
MetaCluster-TA (RRID:SCR_004599), MaxBin (biotools:maxbin)

Annotations

• Expected_value: names and versions of software(s) used

LinkML Source

name: bin_software
annotations:
  Expected_value:
    tag: Expected_value
    value: names and versions of software(s) used
description: Tool(s) used for the extraction of genomes from metagenomic datasets,
  where possible include a product ID (PID) of the tool(s) used
title: binning software
examples:
- value: MetaCluster-TA (RRID:SCR_004599), MaxBin (biotools:maxbin)
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- software
string_serialization: '{software};{version}{PID}'
slot_uri: MIXS:0000078
alias: bin_software
domain_of:
- Mimag
- Miuvig
range: string