Term: binning parameters (bin_param)

The parameters that have been applied during the extraction of genomes from metagenomic datasets

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use bin_param.

Name	Description	Checklist/Extension
Mimag	Minimum Information About a Metagenome-Assembled Genome	Checklist
Miuvig	Minimum Information About an Uncultivated Virus Genome	Checklist

Properties

Range: BinParamEnum
Cardinality: 0..1

Examples

Value
coverage
kmer

LinkML Source

name: bin_param
description: The parameters that have been applied during the extraction of genomes
  from metagenomic datasets
title: binning parameters
examples:
- value: coverage
  description: was 'coverage and kmer'
- value: kmer
  description: was coverage and kmer
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- parameter
slot_uri: MIXS:0000077
alias: bin_param
domain_of:
- Mimag
- Miuvig
range: BinParamEnum