Term: decontamination software (decontam_software)

Tool(s) used in contamination screening

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use decontam_software.

Name	Description	Checklist/Extension
Mimag	Minimum Information About a Metagenome-Assembled Genome	Checklist
Misag	Minimum Information About a Single Amplified Genome	Checklist

Properties

Range: String
Cardinality: 0..1

Examples

Value
anvi'o

Annotations

Expected_value: enumeration

LinkML Source

name: decontam_software
annotations:
  Expected_value:
    tag: Expected_value
    value: enumeration
description: Tool(s) used in contamination screening
title: decontamination software
examples:
- value: anvi'o
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- software
string_serialization: '[checkm/refinem|anvi''o|prodege|bbtools:decontaminate.sh|acdc|combination]'
slot_uri: MIXS:0000074
alias: decontam_software
domain_of:
- Mimag
- Misag
range: string