Term: taxonomic identity marker (tax_ident)
The phylogenetic marker(s) used to assign an organism name to the SAG or MAG
URI: MIXS:0000053
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use tax_ident.
| Name | Description | Checklist/Extension |
|---|---|---|
| MigsBa | Minimal Information about a Genome Sequence: cultured bacteria/archaea | Checklist |
| MigsOrg | Minimal Information about a Genome Sequence: organelle | Checklist |
| Misag | Minimum Information About a Single Amplified Genome | Checklist |
| MigsEu | Minimal Information about a Genome Sequence: eukaryote | Checklist |
| MigsPl | Minimal Information about a Genome Sequence: plasmid | Checklist |
| MigsVi | Minimal Information about a Genome Sequence: virus | Checklist |
| Mimag | Minimum Information About a Metagenome-Assembled Genome | Checklist |
| Miuvig | Minimum Information About an Uncultivated Virus Genome | Checklist |
Properties
- Range: TaxIdentEnum
- Cardinality: 0..1
Examples
| Value |
|---|
| other |
LinkML Source
name: tax_ident
description: The phylogenetic marker(s) used to assign an organism name to the SAG
or MAG
title: taxonomic identity marker
examples:
- value: other
description: was other <colon> rpoB gene
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- identifier
- marker
- taxon
slot_uri: MIXS:0000053
alias: tax_ident
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- Misag
- Miuvig
range: TaxIdentEnum