Term: multiplex identifiers (mid)

Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag unique samples in a sequencing run. Sequence should be reported in uppercase letters

URI: MIXS:0000047

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use mid.

Name	Description	Checklist/Extension
MimarksS	Minimal Information about a Marker Sequence: survey	Checklist
Agriculture	A collection of terms appropriate when sequencing samples obtained in an agri...	Extension
MimsMisip	Metagenome or Environmental with SIP	Checklist
Miuvig	Minimum Information About an Uncultivated Virus Genome	Checklist
Misag	Minimum Information About a Single Amplified Genome	Checklist
Mimag	Minimum Information About a Metagenome-Assembled Genome	Checklist
Mims	Metagenome or Environmental	Checklist

Properties

• Range: String

• Cardinality: 0..1

• Structured pattern: ^{dna_bases}$

Examples

Value
GTGAATAT

LinkML Source

name: mid
description: Molecular barcodes, called Multiplex Identifiers (MIDs), that are used
  to specifically tag unique samples in a sequencing run. Sequence should be reported
  in uppercase letters
title: multiplex identifiers
examples:
- value: GTGAATAT
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- identifier
slot_uri: MIXS:0000047
alias: mid
domain_of:
- MimsMisip
- Mimag
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
range: string
structured_pattern:
  syntax: ^{dna_bases}$
  interpolated: true
  partial_match: true