Term: target subfragment (target_subfragment)
Name of subfragment of a gene or locus. Important to e.g. identify special regions on marker genes like V6 on 16S rRNA
URI: MIXS:0000045
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use target_subfragment.
| Name | Description | Checklist/Extension |
|---|---|---|
| MimarksS | Minimal Information about a Marker Sequence: survey | Checklist |
| MimarksC | Minimal Information about a Marker Sequence: specimen | Checklist |
| Agriculture | A collection of terms appropriate when sequencing samples obtained in an agri... | Extension |
Properties
- Range: String
- Cardinality: 0..1
Examples
| Value |
|---|
| V6, V9, ITS |
LinkML Source
name: target_subfragment
description: Name of subfragment of a gene or locus. Important to e.g. identify special
regions on marker genes like V6 on 16S rRNA
title: target subfragment
examples:
- value: V6, V9, ITS
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- target
slot_uri: MIXS:0000045
alias: target_subfragment
domain_of:
- MimarksC
- MimarksS
- Agriculture
range: string