Term: library layout (lib_layout)
Specify whether to expect single, paired, or other configuration of reads
URI: MIXS:0000041
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use lib_layout.
| Name | Description | Checklist/Extension |
|---|---|---|
| MigsPl | Minimal Information about a Genome Sequence: plasmid | Checklist |
| MigsEu | Minimal Information about a Genome Sequence: eukaryote | Checklist |
| MigsVi | Minimal Information about a Genome Sequence: virus | Checklist |
| MimarksS | Minimal Information about a Marker Sequence: survey | Checklist |
| Agriculture | A collection of terms appropriate when sequencing samples obtained in an agri... | Extension |
| MimsMisip | Metagenome or Environmental with SIP | Checklist |
| Miuvig | Minimum Information About an Uncultivated Virus Genome | Checklist |
| MigsOrg | Minimal Information about a Genome Sequence: organelle | Checklist |
| Mimag | Minimum Information About a Metagenome-Assembled Genome | Checklist |
| Misag | Minimum Information About a Single Amplified Genome | Checklist |
| MigsBa | Minimal Information about a Genome Sequence: cultured bacteria/archaea | Checklist |
| Mims | Metagenome or Environmental | Checklist |
Properties
- Range: LibLayoutEnum
- Cardinality: 0..1
Examples
| Value |
|---|
| paired |
LinkML Source
name: lib_layout
description: Specify whether to expect single, paired, or other configuration of reads
title: library layout
examples:
- value: paired
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
keywords:
- library
slot_uri: MIXS:0000041
alias: lib_layout
domain_of:
- MimsMisip
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
range: LibLayoutEnum