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Term: nucleic acid amplification (nucl_acid_amp)

A link to a literature reference, electronic resource or a standard operating procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of specific nucleic acids

URI: MIXS:0000038

Applicable Checklists and Extensions

NOTE: does not include Combinations (of checklists and extensions) that use nucl_acid_amp.

Name Description Checklist/Extension
MigsPl Minimal Information about a Genome Sequence: plasmid Checklist
MigsEu Minimal Information about a Genome Sequence: eukaryote Checklist
MimarksC Minimal Information about a Marker Sequence: specimen Checklist
MigsVi Minimal Information about a Genome Sequence: virus Checklist
MimarksS Minimal Information about a Marker Sequence: survey Checklist
Agriculture A collection of terms appropriate when sequencing samples obtained in an agri... Extension
MimsMisip Metagenome or Environmental with SIP Checklist
Miuvig Minimum Information About an Uncultivated Virus Genome Checklist
MigsOrg Minimal Information about a Genome Sequence: organelle Checklist
Mimag Minimum Information About a Metagenome-Assembled Genome Checklist
Misag Minimum Information About a Single Amplified Genome Checklist
MigsBa Minimal Information about a Genome Sequence: cultured bacteria/archaea Checklist
Mims Metagenome or Environmental Checklist

Properties

  • Range: String

  • Cardinality: 0..1

  • Structured pattern: ^({PMID}|{DOI}|{URL})$

Examples

Value
https://phylogenomics.me/protocols/16s-pcr-protocol/

LinkML Source

name: nucl_acid_amp
description: A link to a literature reference, electronic resource or a standard operating
  procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of
  specific nucleic acids
title: nucleic acid amplification
examples:
- value: https://phylogenomics.me/protocols/16s-pcr-protocol/
in_subset:
- sequencing
from_schema: https://w3id.org/mixs
slot_uri: MIXS:0000038
alias: nucl_acid_amp
domain_of:
- MimsMisip
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
range: string
structured_pattern:
  syntax: ^({PMID}|{DOI}|{URL})$
  interpolated: true
  partial_match: true