Term: encoded traits (encoded_traits)
Should include key traits like antibiotic resistance or xenobiotic degradation phenotypes for plasmids, converting genes for phage
URI: MIXS:0000034
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use encoded_traits.
| Name | Description | Checklist/Extension |
|---|---|---|
| MigsVi | Minimal Information about a Genome Sequence: virus | Checklist |
| MigsBa | Minimal Information about a Genome Sequence: cultured bacteria/archaea | Checklist |
| MigsPl | Minimal Information about a Genome Sequence: plasmid | Checklist |
Properties
- Range: String
- Cardinality: 0..1
Examples
| Value |
|---|
| beta-lactamase class A |
Annotations
- Expected_value: for plasmid: antibiotic resistance; for phage: converting genes
LinkML Source
name: encoded_traits
annotations:
Expected_value:
tag: Expected_value
value: 'for plasmid: antibiotic resistance; for phage: converting genes'
description: Should include key traits like antibiotic resistance or xenobiotic degradation
phenotypes for plasmids, converting genes for phage
title: encoded traits
examples:
- value: beta-lactamase class A
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/mixs
slot_uri: MIXS:0000034
alias: encoded_traits
domain_of:
- MigsBa
- MigsPl
- MigsVi
range: string