Term: sample material processing (samp_mat_process)
A brief description of any processing applied to the sample during or after retrieving the sample from environment, or a link to the relevant protocol(s) performed
URI: MIXS:0000016
Applicable Checklists and Extensions
NOTE: does not include Combinations (of checklists and extensions) that use samp_mat_process.
| Name | Description | Checklist/Extension |
|---|---|---|
| MigsPl | Minimal Information about a Genome Sequence: plasmid | Checklist |
| MigsEu | Minimal Information about a Genome Sequence: eukaryote | Checklist |
| MimarksC | Minimal Information about a Marker Sequence: specimen | Checklist |
| MigsVi | Minimal Information about a Genome Sequence: virus | Checklist |
| MimarksS | Minimal Information about a Marker Sequence: survey | Checklist |
| Agriculture | A collection of terms appropriate when sequencing samples obtained in an agri... | Extension |
| MimsMisip | Metagenome or Environmental with SIP | Checklist |
| Miuvig | Minimum Information About an Uncultivated Virus Genome | Checklist |
| MigsOrg | Minimal Information about a Genome Sequence: organelle | Checklist |
| Mimag | Minimum Information About a Metagenome-Assembled Genome | Checklist |
| Misag | Minimum Information About a Single Amplified Genome | Checklist |
| MigsBa | Minimal Information about a Genome Sequence: cultured bacteria/archaea | Checklist |
| Mims | Metagenome or Environmental | Checklist |
Properties
- Range: String
- Cardinality: 0..1
Examples
| Value |
|---|
| filtering of seawater, storing samples in ethanol |
LinkML Source
name: samp_mat_process
description: A brief description of any processing applied to the sample during or
after retrieving the sample from environment, or a link to the relevant protocol(s)
performed
title: sample material processing
examples:
- value: filtering of seawater, storing samples in ethanol
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/mixs
keywords:
- material
- process
- sample
slot_uri: MIXS:0000016
alias: samp_mat_process
domain_of:
- MimsMisip
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
- Agriculture
range: string