Skip to content

Slot: sample collection method (samp_collect_method)

The method employed for collecting the sample

URI: MIXS:0001225

Applicable Classes

Name Description Modifies Slot
Mims Metagenome or Environmental yes
MimsSoil MIxS Data that comply with the Mims checklist and the Soil Extension no

Properties

  • Range: String

  • Regex pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox

Mappings

Mapping Type Mapped Value
self MIXS:0001225
native mixs_missing_value_sandbox:samp_collect_method

LinkML Source

name: samp_collect_method
description: The method employed for collecting the sample
title: sample collection method
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
rank: 1000
keywords:
- method
- sample
slot_uri: MIXS:0001225
alias: samp_collect_method
domain_of:
- Mims
range: string
pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{PMID}|{DOI}|{URL}|{text}$
  interpolated: true
  partial_match: true