Slot: reference for biomaterial (ref_biomaterial)
Primary publication if isolated before genome publication; otherwise, primary genome report
URI: MIXS:0000025
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Mims | Metagenome or Environmental | no |
| MimsSoil | MIxS Data that comply with the Mims checklist and the Soil Extension | no |
Properties
-
Range: String
-
Regex pattern:
^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
Examples
| Value |
|---|
| doi:10.1016/j.syapm.2018.01.009 |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | MIXS:0000025 |
| native | mixs_missing_value_sandbox:ref_biomaterial |
LinkML Source
name: ref_biomaterial
description: Primary publication if isolated before genome publication; otherwise,
primary genome report
title: reference for biomaterial
examples:
- value: doi:10.1016/j.syapm.2018.01.009
in_subset:
- nucleic acid sequence source
from_schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
rank: 1000
slot_uri: MIXS:0000025
alias: ref_biomaterial
domain_of:
- Mims
range: string
pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
structured_pattern:
syntax: ^{PMID}|{DOI}|{URL}$
interpolated: true
partial_match: true