Slot: number of contigs (number_contig)

Total number of contigs in the cleaned/submitted assembly that makes up a given genome, SAG, MAG, or UViG

URI: MIXS:0000060

Applicable Classes

Name	Description	Modifies Slot
Mims	Metagenome or Environmental	yes
MimsSoil	MIxS Data that comply with the Mims checklist and the Soil Extension	no

Properties

• Range: Integer

Examples

Value
40

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox

Mappings

Mapping Type	Mapped Value
self	MIXS:0000060
native	mixs_missing_value_sandbox:number_contig

LinkML Source

name: number_contig
description: Total number of contigs in the cleaned/submitted assembly that makes
  up a given genome, SAG, MAG, or UViG
title: number of contigs
examples:
- value: '40'
in_subset:
- sequencing
from_schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
rank: 1000
keywords:
- number
slot_uri: MIXS:0000060
alias: number_contig
domain_of:
- Mims
range: integer