Slot: nucleic acid amplification (nucl_acid_amp)

A link to a literature reference, electronic resource or a standard operating procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of specific nucleic acids

URI: MIXS:0000038

Applicable Classes

Name	Description	Modifies Slot
Mims	Metagenome or Environmental	yes
MimsSoil	MIxS Data that comply with the Mims checklist and the Soil Extension	no

Properties

• Range: String

• Regex pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$

Examples

Value
https://phylogenomics.me/protocols/16s-pcr-protocol/

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox

Mappings

Mapping Type	Mapped Value
self	MIXS:0000038
native	mixs_missing_value_sandbox:nucl_acid_amp

LinkML Source

name: nucl_acid_amp
description: A link to a literature reference, electronic resource or a standard operating
  procedure (SOP), that describes the enzymatic amplification (PCR, TMA, NASBA) of
  specific nucleic acids
title: nucleic acid amplification
examples:
- value: https://phylogenomics.me/protocols/16s-pcr-protocol/
in_subset:
- sequencing
from_schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
rank: 1000
slot_uri: MIXS:0000038
alias: nucl_acid_amp
domain_of:
- Mims
range: string
pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
structured_pattern:
  syntax: ^{PMID}|{DOI}|{URL}$
  interpolated: true
  partial_match: true