Slot: multiplex identifiers (mid)

Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to specifically tag unique samples in a sequencing run. Sequence should be reported in uppercase letters

URI: MIXS:0000047

Applicable Classes

Name	Description	Modifies Slot
Mims	Metagenome or Environmental	yes
MimsSoil	MIxS Data that comply with the Mims checklist and the Soil Extension	no

Properties

• Range: String

• Regex pattern: ^[ACGTRKSYMWBHDVN]+$

Examples

Value
GTGAATAT

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox

Mappings

Mapping Type	Mapped Value
self	MIXS:0000047
native	mixs_missing_value_sandbox:mid

LinkML Source

name: mid
description: Molecular barcodes, called Multiplex Identifiers (MIDs), that are used
  to specifically tag unique samples in a sequencing run. Sequence should be reported
  in uppercase letters
title: multiplex identifiers
examples:
- value: GTGAATAT
in_subset:
- sequencing
from_schema: https://w3id.org/GenomicsStandardsConsortium/mixs-missing-value-sandbox
rank: 1000
keywords:
- identifier
slot_uri: MIXS:0000047
alias: mid
domain_of:
- Mims
range: string
pattern: ^[ACGTRKSYMWBHDVN]+$
structured_pattern:
  syntax: ^{ambiguous_nucleotides}$
  interpolated: true
  partial_match: true