| adapters |
Adapters provide priming sequences for both amplification and sequencing of t... |
| agrochem_addition |
Addition of fertilizers, pesticides, etc |
| al_sat |
Aluminum saturation (esp |
| al_sat_meth |
Reference or method used in determining Al saturation |
| alt |
Heights of objects such as airplanes, space shuttles, rockets, atmospheric ba... |
| annot |
Tool used for annotation, or for cases where annotation was provided by a com... |
| annual_precpt |
The average of all annual precipitation values known, or an estimated equival... |
| annual_temp |
Mean annual temperature |
| assembly_name |
Name/version of the assembly provided by the submitter that is used in the ge... |
| assembly_qual |
The assembly quality category is based on sets of criteria outlined for each ... |
| assembly_software |
Tool(s) used for assembly, including version number and parameters |
| associated_resource |
A related resource that is referenced, cited, or otherwise associated to the ... |
| collection_date |
The time of sampling, either as an instance (single point in time) or interva... |
| conflicting |
intentionally set to incompatible states between a Checklist and an Extension |
| crop_rotation |
Whether or not crop is rotated, and if yes, rotation schedule |
| cur_land_use |
Present state of sample site |
| cur_vegetation |
Vegetation classification from one or more standard classification systems, o... |
| cur_vegetation_meth |
Reference or method used in vegetation classification |
| depth |
The vertical distance below local surface |
| drainage_class |
Drainage classification from a standard system such as the USDA system |
| elev |
Elevation of the sampling site is its height above a fixed reference point, m... |
| env_broad_scale |
Report the major environmental system the sample or specimen came from |
| env_local_scale |
Report the entity or entities which are in the sample or specimen s local vic... |
| env_medium |
Report the environmental material(s) immediately surrounding the sample or sp... |
| experimental_factor |
Variable aspects of an experiment design that can be used to describe an expe... |
| extreme_event |
Unusual physical events that may have affected microbial populations |
| fao_class |
Soil classification from the FAO World Reference Database for Soil Resources |
| feat_pred |
Method used to predict UViGs features such as ORFs, integration site, etc |
| fire |
Historical and/or physical evidence of fire |
| flooding |
Historical and/or physical evidence of flooding |
| geo_loc_name |
The geographical origin of the sample as defined by the country or sea name f... |
| heavy_metals |
Heavy metals present in the sequenced sample and their concentrations |
| heavy_metals_meth |
Reference or method used in determining heavy metals |
| horizon_meth |
Reference or method used in determining the horizon |
| lat_lon |
The geographical origin of the sample as defined by latitude and longitude |
| lib_layout |
Specify whether to expect single, paired, or other configuration of reads |
| lib_reads_seqd |
Total number of clones sequenced from the library |
| lib_screen |
Specific enrichment or screening methods applied before and/or after creating... |
| lib_size |
Total number of clones in the library prepared for the project |
| lib_vector |
Cloning vector type(s) used in construction of libraries |
| link_addit_analys |
Link to additional analysis results performed on the sample |
| link_class_info |
Link to digitized soil maps or other soil classification information |
| link_climate_info |
Link to climate resource |
| local_class |
Soil classification based on local soil classification system |
| local_class_meth |
Reference or method used in determining the local soil classification |
| micro_biomass_meth |
Reference or method used in determining microbial biomass |
| microbial_biomass |
The part of the organic matter in the soil that constitutes living microorgan... |
| mid |
Molecular barcodes, called Multiplex Identifiers (MIDs), that are used to spe... |
| mims_soil_data |
Data that comply with Mims combined with Soil |
| misc_param |
Any other measurement performed or parameter collected, that is not listed he... |
| neg_cont_type |
The substance or equipment used as a negative control in an investigation |
| nucl_acid_amp |
A link to a literature reference, electronic resource or a standard operating... |
| nucl_acid_ext |
A link to a literature reference, electronic resource or a standard operating... |
| number_contig |
Total number of contigs in the cleaned/submitted assembly that makes up a giv... |
| org_matter |
Concentration of organic matter |
| org_nitro |
Concentration of organic nitrogen |
| ph |
Ph measurement of the sample, or liquid portion of sample, or aqueous phase o... |
| ph_meth |
Reference or method used in determining pH |
| pool_dna_extracts |
Indicate whether multiple DNA extractions were mixed |
| pos_cont_type |
The substance, mixture, product, or apparatus used to verify that a process w... |
| prev_land_use_meth |
Reference or method used in determining previous land use and dates |
| previous_land_use |
Previous land use and dates |
| profile_position |
Cross-sectional position in the hillslope where sample was collected |
| project_name |
Name of the project within which the sequencing was organized |
| ref_biomaterial |
Primary publication if isolated before genome publication; otherwise, primary... |
| ref_db |
List of database(s) used for ORF annotation, along with version number and re... |
| rel_to_oxygen |
Is this organism an aerobe, anaerobe? Please note that aerobic and anaerobic ... |
| samp_collect_device |
The device used to collect an environmental sample |
| samp_collect_method |
The method employed for collecting the sample |
| samp_mat_process |
A brief description of any processing applied to the sample during or after r... |
| samp_name |
A local identifier or name that for the material sample used for extracting n... |
| samp_size |
The total amount or size (volume (ml), mass (g) or area (m2) ) of sample coll... |
| samp_taxon_id |
NCBI taxon id of the sample |
| samp_vol_we_dna_ext |
Volume (ml) or mass (g) of total collected sample processed for DNA extractio... |
| season_precpt |
The average of all seasonal precipitation values known, or an estimated equiv... |
| season_temp |
Mean seasonal temperature |
| seq_meth |
Sequencing machine used |
| sieving |
Collection design of pooled samples and/or sieve size and amount of sample si... |
| sim_search_meth |
Tool used to compare ORFs with database, along with version and cutoffs used |
| size_frac |
Filtering pore size used in sample preparation |
| slope_aspect |
The direction a slope faces |
| slope_gradient |
Commonly called 'slope' |
| soil_data |
Data that comply with Extension Soil |
| soil_horizon |
Specific layer in the land area which measures parallel to the soil surface a... |
| soil_texture |
The relative proportion of different grain sizes of mineral particles in a so... |
| soil_texture_meth |
Reference or method used in determining soil texture |
| soil_type |
Description of the soil type or classification |
| soil_type_meth |
Reference or method used in determining soil series name or other lower-level... |
| sop |
Standard operating procedures used in assembly and/or annotation of genomes, ... |
| source_mat_id |
A unique identifier assigned to a material sample (as defined by http://rs |
| store_cond |
Explain how and for how long the soil sample was stored before DNA extraction... |
| tax_class |
Method used for taxonomic classification, along with reference database used,... |
| temp |
Temperature of the sample at the time of sampling |
| tillage |
Note method(s) used for tilling |
| tot_nitro_cont_meth |
Reference or method used in determining the total nitrogen |
| tot_nitro_content |
Total nitrogen content of the sample |
| tot_org_c_meth |
Reference or method used in determining total organic carbon |
| tot_org_carb |
Total organic carbon content |
| water_cont_soil_meth |
Reference or method used in determining the water content of soil |
| water_content |
Water content measurement |