Term: serovar_or_serotype

A characterization of a cell or microorganism based on the antigenic properties of the molecules on its surface. Indicate the name of a serovar or serotype of interest. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250). This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy

URI: MIXS:0001157

Properties

• Range: String

• Multivalued: True

• Structured pattern: ^({termLabel} \[{termID}\])|{integer}$

• Regex pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$

Examples

Value
Escherichia coli strain O157:H7 [NCIT:C86883]

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/mixs-6-2-rc

LinkML Source

name: serovar_or_serotype
description: A characterization of a cell or microorganism based on the antigenic
  properties of the molecules on its surface. Indicate the name of a serovar or serotype
  of interest. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
  This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy
title: serovar or serotype
examples:
- value: Escherichia coli strain O157:H7 [NCIT:C86883]
from_schema: https://w3id.org/mixs-6-2-rc
slot_uri: MIXS:0001157
multivalued: true
alias: serovar_or_serotype
domain_of:
- FoodAnimalAndAnimalFeed
- FoodFarmEnvironment
- FoodHumanFoods
range: string
required: false
recommended: false
pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
structured_pattern:
  syntax: ^({termLabel} \[{termID}\])|{integer}$
  interpolated: true
  partial_match: true