Term: samp_taxon_id

NCBI taxon id of the sample. Maybe be a single taxon or mixed taxa sample. Use 'synthetic metagenome for mock community/positive controls, or 'blank sample' for negative controls

URI: MIXS:0001320

Properties

• Range: String

• Required: True

• Structured pattern: ^{text} \[{NCBItaxon_id}\]$

• Regex pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[NCBITaxon:\d+\]$

Examples

Value
Gut Metagenome [NCBITaxon:749906]

Identifier and Mapping Information

Schema Source

• from schema: https://w3id.org/mixs-6-2-rc

LinkML Source

name: samp_taxon_id
description: NCBI taxon id of the sample.  Maybe be a single taxon or mixed taxa sample.
  Use 'synthetic metagenome  for mock community/positive controls, or 'blank sample'
  for negative controls
title: taxonomy ID of DNA sample
examples:
- value: Gut Metagenome [NCBITaxon:749906]
in_subset:
- investigation
from_schema: https://w3id.org/mixs-6-2-rc
keywords:
- dna
- identifier
- sample
- taxon
slot_uri: MIXS:0001320
multivalued: false
alias: samp_taxon_id
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- MimarksC
- MimarksS
- Mims
- Misag
- Miuvig
range: string
required: true
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[NCBITaxon:\d+\]$
structured_pattern:
  syntax: ^{text} \[{NCBItaxon_id}\]$
  interpolated: true
  partial_match: true