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Term: feat_pred

Method used to predict UViGs features such as ORFs, integration site, etc

URI: MIXS:0000061

Properties

  • Range: String

  • Structured pattern: ^{software};{version};{parameters}$

  • Regex pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$

Examples

Value
Prodigal;2.6.3;default parameters

Identifier and Mapping Information

Schema Source

  • from schema: https://w3id.org/mixs-6-2-rc

LinkML Source

name: feat_pred
description: Method used to predict UViGs features such as ORFs, integration site,
  etc
title: feature prediction
examples:
- value: Prodigal;2.6.3;default parameters
in_subset:
- sequencing
from_schema: https://w3id.org/mixs-6-2-rc
keywords:
- feature
- predict
slot_uri: MIXS:0000061
multivalued: false
alias: feat_pred
domain_of:
- MigsBa
- MigsEu
- MigsOrg
- MigsPl
- MigsVi
- Mimag
- Mims
- Misag
- Miuvig
range: string
pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
structured_pattern:
  syntax: ^{software};{version};{parameters}$
  interpolated: true
  partial_match: true